Columba livia (rock pigeon): 102094969
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Entry
102094969 CDS
T02912
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102094969 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
102094969 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102094969 (LSM3)
03041 Spliceosome [BR:
clv03041
]
102094969 (LSM3)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102094969 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
102094969 (LSM3)
Spliceosome [BR:
clv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102094969 (LSM3)
Complex C
U2 snRNP components
102094969 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
102094969
NCBI-ProteinID:
XP_021150267
LinkDB
All DBs
Position
Unknown
AA seq
109 aa
AA seq
DB search
MAAPASSPGKEEVQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMI
LGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccagcttcctcaccagggaaggaggaggtgcagcaacaaaccaccaatact
gtagaggagccacttgatctcatcagactcagtctagatgagcgaatctatgtcaaaatg
aggaatgacagagagcttagaggcagactacatgcttatgatcagcacttaaatatgatt
ttgggtgatgtggaagaaactgtaactacaatagagattgatgaagaaacttatgaagag
atttataaatctaccaaaaggaatattccgatgctctttgtcagaggtgacggcgttgtg
cttgtagctcccccgttgcgggttggttga
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