Cellulophaga lytica DSM 7489: Celly_2018
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Entry
Celly_2018 CDS
T01434
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly00300
Lysine biosynthesis
cly00550
Peptidoglycan biosynthesis
cly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Celly_2018
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Celly_2018
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cly01011
]
Celly_2018
Enzymes [BR:
cly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Celly_2018
Peptidoglycan biosynthesis and degradation proteins [BR:
cly01011
]
Precursor biosynthesis
Amino acid ligase
Celly_2018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
DUF3440
CbiA
MobB
Motif
Other DBs
NCBI-ProteinID:
ADY29840
UniProt:
F0RDS9
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All DBs
Position
2266522..2267985
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AA seq
487 aa
AA seq
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MKLLKDILYGVGIVAVNGTTDTMVNAICFDSRKVGLDDVFVAVKGTLVDGHSYIDTALNA
GANAIICETMPVNLVNGITYVQVKNGNAALAIMASNFYGTPSKNLKLVGVTGTNGKTTIS
SLLYQLFKKAGYKVGLLSTIKIMIDDKEIKATHTTPDAITINKSLAEMNNAGVEFCFMEV
SSHGIHQKRIEGLVFEGAIFTNLSHDHLDYHKTFAEYRDTKKLLFDGLPKTAWALTNIDD
KNGAVMLQNTKAKKQTYALKTYADFRAQILENQFSGQLLKIDDNELWSKLIGDFNAYNML
AIYATAQLLGLEKMEILRLLSELENVDGRFQYYISGKNITAIVDYAHTPDALKNVLNTIN
ALRTGNEDVITVVGCGGDRDKSKRPVMGHIASEMSTKVVFTSDNPRTESPSEILKEVEAG
VEAQNTRKVLTIENREQAIKTACQLAQPKDIILIAGKGHETYQETNGVRIDFDDYKIVKQ
LLTSLEK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattattaaaagacatattatacggtgtaggtattgttgctgtaaatggcactaca
gatactatggttaatgccatatgttttgactctagaaaagtagggttagatgatgtattt
gtagctgtaaaaggcacacttgtagatggtcatagttatatagataccgctttaaatgct
ggtgcaaatgctataatatgtgaaactatgccagttaacctggttaatggtattacatat
gtacaagtaaaaaatggtaatgctgccttggctataatggcttctaatttttacggtacg
ccatctaaaaatttaaaactagttggtgtaacaggtactaatggtaaaaccactattagc
agcttgttgtatcaattatttaaaaaagcaggttataaggtgggtttactatcaactatt
aaaataatgatagatgataaagagattaaggcaacacatacaacaccagatgctattaca
ataaacaaatctttggcagagatgaataatgcaggagtagagttttgttttatggaggtg
agctctcacggtattcatcaaaaaagaatagaaggtttggtttttgaaggcgccattttt
accaatttatctcatgatcatttagactatcataaaacttttgcagaatatagggatact
aaaaagttgttgtttgatggtctgccaaaaacagcatgggcacttaccaatatagatgat
aaaaatggtgctgttatgctgcaaaataccaaggcaaaaaagcagacatacgcattaaaa
acatacgcagactttagagctcaaatattagaaaatcagtttagcggacaattgctaaag
attgatgataatgagctttggtctaaattaataggagattttaatgcttacaatatgctt
gctatatatgcaactgcgcaattgttaggattagaaaaaatggaaattctacgtctttta
agtgaattagaaaacgtagacggaagatttcaatattacatatctggtaaaaatattaca
gctatagtagattatgctcatactccggatgctttaaaaaatgtactgaacactatcaat
gcattgaggacaggaaatgaagacgtcatcaccgttgtggggtgtggtggcgacagagac
aagtcaaaacgtccggttatgggtcatattgcttcagaaatgagtacaaaagtggttttt
acatcagataatccaaggacagaatctccttcagaaattttaaaagaggtagaggctggt
gtagaagcgcaaaatacgcgcaaggtgttaacaatagaaaatagagagcaagcaataaaa
actgcttgtcagttagcacaacctaaagatattattttaatagcaggtaaaggtcatgaa
acataccaagaaactaatggtgtgcgcatagattttgacgattataaaattgtaaaacaa
ttactaacaagtttagaaaagtaa
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