Chlorobaculum limnaeum: BIU88_09105 Help Entry BIU88_09105       CDS       T04492                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism clz  Chlorobaculum limnaeum Pathway clz03030   DNA replication clz03410   Base excision repair clz03420   Nucleotide excision repair clz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:clz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BIU88_09105    03410 Base excision repair     BIU88_09105    03420 Nucleotide excision repair     BIU88_09105    03430 Mismatch repair     BIU88_09105  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:clz03032]     BIU88_09105    03400 DNA repair and recombination proteins [BR:clz03400]     BIU88_09105 Enzymes [BR:clz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BIU88_09105 DNA replication proteins [BR:clz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BIU88_09105 DNA repair and recombination proteins [BR:clz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BIU88_09105    NER (nucleotide excision repair)     GGR (global genome repair) factors      BIU88_09105    MMR (mismatch excision repair)     DNA ligase      BIU88_09105   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BIU88_09105 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia HHH BRCT_2 HMBD Zn_ribbon_PF0610 DUF4796_N Zn_ribbon_6 Motif Other DBs NCBI-ProteinID:  AOS84274 UniProt:  A0A1D8D692 LinkDB All DBs Position complement(2015547..2017571) Genome browser AA seq 674 aa AA seqDB search MDKAKAQQEITQLRTEIERHNRLYYLEAKPEISDFEFDKLLERLIAIEKEFPELLTPDSP SQRVGGGITKEFPTVVHREPMLSLSNTYSIAEVTDFCNRVEKLVEAEGGGTPEYVAELKF DGVAISLLYRDGLLVRGSTRGDGRQGDEITANLRTIPSIPLRLDSPGGSLFDSAVSGEIE VRGEVYMRKADFDRLNEERPDEEQFANPRNATAGTLKLQDSSEVARRRMHFVAYFLKGIA DESTPHLLRLQRLESMGFATGKHYKLCKSVAQVAAFIDEWAEKRHALPYETDGVVLKLND VMLWDRLGATAKSPRWAIAYKYPAQQAKTVLQGVVFQVGRLGTITPVAELKPVKLAGSTV SRSTLHNFDEIERLGVRVGDHVMIEKSGEVIPKVVSVLLDERPAETAEIEVPERCPECGT KLERPEGEVSWYCPNEERCPAQKRGRILHFASRNALDIQNLGESLVAQLVERGLASDAGD LYSLTLEQLVGLDRMAAKSAQNVLDALEKSKTRGYDRLLFALGIRHVGAATARELAHACP SIDRLREMGEEELAAVPDIGPVIAASIRDFFAKPWAQAMLQKLADAGLPMQAGEEKTLVN NNFEGQSVIFTGSLERHVRQQAEEMVRERGGRIVSSVSKKTTLVVAGKEAGSKLEKAMKL GVKVIDEDEFERML NT seq 2025 nt NT seq  +upstreamnt  +downstreamnt atggataaagcgaaagcacagcaggagataacacagcttcggacggagatcgaacgccac aaccggctctactatctcgaagccaaaccggagatttcggactttgagttcgacaagctg ctcgaacggctgatcgcgatcgaaaaggagttcccggaactgctgacgcccgacagcccc tcgcagcgcgtcggcggcggcatcaccaaagagtttccgacggtcgtgcaccgcgagccg atgctcagcctctcgaacacatactccatcgcggaggtgactgacttctgcaatcgcgtt gaaaagctggtcgaggcagaggggggcggcacgccggaatacgtcgccgagttgaagttc gatggcgtagcgatcagcctgctttaccgcgatggcctgctcgttcgcggttcaacgcgc ggcgacgggcggcaaggggacgagatcacggcgaacctccgaacgatcccgtccattccg ctccggctcgactctccgggcggctcgctcttcgactcggcggtcagcggcgaaatcgag gtgcgcggtgaagtgtacatgcgcaaagccgatttcgaccgcctcaacgaggagcgcccg gatgaggagcagttcgccaacccgcgcaacgccaccgccggtacgctgaaattgcaggac tcctcggaggtcgcccgccgccggatgcacttcgttgcctacttcctcaaggggatcgcc gacgaatcgacgccgcatcttcttcgcctgcaacgacttgaaagcatgggcttcgcgacc ggcaaacactacaagctctgcaaaagcgtcgcgcaggtcgccgcctttatcgacgaatgg gcggagaagcgccacgcgctgccgtacgagaccgatggcgtggtgctcaagctcaacgat gtgatgctttgggatcgcctcggcgcgaccgccaaaagcccgcgctgggcgattgcctat aagtacccggcgcagcaggccaagaccgtgctgcaaggcgtggtgttccaggtcgggcgt ctcggcaccatcacgccggtggcggaactgaagccggtgaagctcgcgggatcgaccgtt tcgcgctccacgctgcataacttcgacgaaatcgaacggctcggcgtgcgcgttggcgac cacgtcatgattgaaaagtcgggcgaagtgattccgaaagtggttagcgtgttgctcgac gaacgtccggcagagactgccgagatcgaagtgccggagcgctgcccggagtgcggcacg aagctggagcggcccgaaggggaggtgagctggtattgcccgaacgaggagagatgcccc gcgcagaagcgagggcggattctgcacttcgcctcgcgcaacgccctcgacatccagaat ctcggcgaatcgctcgtggcgcagctcgtcgagcgcggcctcgcgagcgacgcgggcgac ctctacagcctcacgctggagcagctcgtgggcctcgaccggatggccgccaaatcagcg caaaacgtgctcgacgcgctcgaaaagagcaagacgcgcggctacgaccgcctgctcttc gccctcggcatccgccacgtcggcgcagccacggcaagggaactggcccacgcctgcccc tccatcgaccgcctccgcgagatgggcgaggaggaactcgccgccgtgcccgacatcggc cccgtcatcgccgcaagcatccgcgacttcttcgccaaaccctgggcgcaagccatgctc caaaagctcgccgacgccggattaccgatgcaagccggcgaggaaaaaacgctcgtcaac aataattttgaaggccagtccgtcatcttcacaggctccctcgaacgccacgtccgccag caagccgaagagatggtccgagaacgcggcggcagaatcgtcagctcggtgagcaaaaag acaacgctcgtcgtcgcaggtaaagaggccgggagcaagctcgaaaaagcgatgaagctg ggggtgaaggtgattgatgaggatgagttcgagcggatgctgtaa

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