Chlorobaculum limnaeum: BIU88_09310
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Entry
BIU88_09310 CDS
T04492
Name
(GenBank) multidrug efflux RND transporter permease
KO
K18138
multidrug efflux pump
Organism
clz
Chlorobaculum limnaeum
Pathway
clz01501
beta-Lactam resistance
clz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BIU88_09310
01503 Cationic antimicrobial peptide (CAMP) resistance
BIU88_09310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clz02000
]
BIU88_09310
01504 Antimicrobial resistance genes [BR:
clz01504
]
BIU88_09310
Transporters [BR:
clz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BIU88_09310
Antimicrobial resistance genes [BR:
clz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BIU88_09310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AOS84309
UniProt:
A0A1D8D951
LinkDB
All DBs
Position
complement(2064845..2068012)
Genome browser
AA seq
1055 aa
AA seq
DB search
MSGFFIERPVFAWVISICIMLGGIIAINTLPVEQYPRIAAPTIHINASYPGASAEAVENS
VTQVIEQALTGIDHLRYFSSGSDSNGNVTITVTFEPEANPDIAQVQVQNKLQTVMSNLPQ
QVQQQGISVTKGETGFLMVVGVYSDDGRTDEYAMNDFINSKLLDPLSRVPGVGDIQLFGQ
PYSMRIWLDPHRLTSFNLTTTEVQEAITAQNADVSAGQLGGTPSVPGQQLNATITAQSRL
KSVEDFEKIILKVNTDGSQIRLRDVARVELGVQDYGMTTSFNGKPAAGMAITLATGANAL
NTANLVKAKMTSLSPLLPPGMKVVYPFDTTPFVKTSIEGVVHTLIEAVILVFFVMFLFLQ
NFRATLIPTIAVPVVLLGTFGVMSAFGFSINTLSMFAMVLAIGLLVDDAIVVVENVERIM
EEERLSPLEATRKSMKQISSALIGIALVLSAVFVPMAFFKGSTGTIYRQFSITIVSAMLL
SVLVALILTPALCASILKPLNKDGHIQGSGPLGGFFVWFNRVFNRNRERYVNGARVMTGK
VNRSLMAFMLVVMLLGIVFMRIPTSFLPDEDQGFLFIELSTPSGATKERTLESVKVMERY
LLDHEKENVESVFSVAGFSFAGQGQNSAMGFVQLKDWAERRKKGQDVASIASRTMGTLSS
VKDAMIFAFYPPAVMELGNASGFDLQLLDRTGKGHEALMAARNQLLGMASKDPSLVGVRP
NGMEDVPQYKIDIDHEKASAFGVSIADINTTLQTAWGSSYVNDFLHDGRIKKVYMQGDAP
YRMNPSDVEFWHVRNAAGEMVPFGSFSSGRWSYGSPKLERFNGISSVNIQGAPAPGVSSG
DAMATISRMAEKLPEGFGIEWTGLSYEERAAGQQTLLLYSISLLFVFLCLAALYESWSVP
LAVMLVVPLGVLGAVLATFIAGLSNDVYFKVGLLTTVGLTAKNAILIVEFAKTLYDNGMP
LKEAALSAAGQRLRPIVMTSMAFILGVTPLAFSSGAGSASQHAIGIGVMGGMFSGTVLAI
FFVPLFYILVQSRFTRKPATDMAANQNIKGSNDEQ
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatttttcatcgaacggccagtatttgcgtgggtgatctccatctgcatcatg
ctgggtggcatcatcgccatcaacacgctcccggtcgaacagtacccgcgcatcgcggca
ccgaccatccatattaacgcctcctatcccggagcctctgccgaagcggtcgaaaacagc
gtcacgcaggtcatcgaacaggcgctcaccggcatcgaccatctccggtatttcagttct
ggcagcgattcgaatggcaacgtgaccatcacggtgaccttcgagcccgaagccaacccc
gacatcgcacaggtgcaggtgcagaacaagttgcagacggtcatgtcgaacctgccacag
caggtacagcagcagggcatcagtgtcaccaagggcgaaacagggttcctgatggtggtc
ggcgtctattcggatgacggccgcaccgacgaatacgccatgaacgatttcatcaactcg
aaactgctcgacccgctcagccgcgttcccggcgtcggcgatatccagttgtttggccag
ccctactccatgcgcatctggctcgatccccatcgcctcacgagtttcaacctcaccacc
accgaggtacaggaggcaatcaccgcacagaacgcggacgtctccgcaggccagcttgga
ggcacaccatcggtaccaggccaacagctgaacgccactattacggctcagtcacgtctg
aaaagcgtcgaagatttcgaaaaaatcatcctgaaagtcaatacggacggctcgcagatc
cgcctcagggatgtcgcccgcgtcgaactcggtgtacaagactacggcatgaccacaagc
ttcaacggcaaaccggcagccggtatggccatcaccctggcgaccggtgccaatgcactg
aatactgccaaccttgtgaaagcgaaaatgacatcgctgagccccctcctgccgcccggc
atgaaggtcgtttacccgttcgacacgacgccgttcgtcaagacttcgatcgaaggggtt
gtgcacaccctcatcgaagcggtgatccttgttttctttgtcatgttcctgttcctccag
aacttccgtgccacgctgattccgaccatcgcagttcccgtcgtgctgcttggtaccttc
ggagtgatgtcggctttcggcttctccatcaacactctcagtatgttcgccatggtgctc
gcaatcggcctgctggtcgatgacgccatcgtcgtggtcgagaacgtcgaacgcatcatg
gaggaagagcgcctctcaccgctcgaagccaccaggaaatcgatgaagcagatatcaagc
gctctgatcggtatcgccctcgtcctctcggcggtattcgtgccgatggcgtttttcaaa
ggttctaccggaacgatctatcgccagttctcgatcaccattgtgtcggccatgctgctt
tcggtgctggtcgcactgatcctgacccctgcactctgcgccagcattctcaaaccgctc
aacaaagacggccacatccagggcagcggtccactcggcggtttctttgtctggttcaac
cgcgtgttcaaccgtaaccgcgaacgatatgtgaacggcgcacgggtcatgaccggtaaa
gtcaaccgctcgctgatggccttcatgctggttgtgatgctgctgggcattgtcttcatg
cgcatcccgacctcgttcctgcccgacgaagaccagggattccttttcatcgaactctcc
acgccttcgggagcgaccaaggagcggacgctcgaaagcgtgaaagtgatggaacgctac
ctgctcgaccatgagaaagagaacgtcgaaagtgttttcagcgtcgccggattcagtttc
gcaggacaaggccaaaactcggccatgggcttcgtccaactcaaggactgggccgaacgc
aggaaaaaagggcaggatgtggcctcgatcgccagcaggacgatgggcaccctgtcgagc
gtaaaagatgccatgatcttcgcgttttacccaccagccgtcatggagctcggcaacgcc
tcaggcttcgacctccagctgctcgaccggaccggcaaaggacatgaggcgctgatggcc
gcccgaaaccagctcctgggcatggcatcgaaagatccttcgctggtcggcgtccgaccc
aacggaatggaggatgtgccgcaatacaaaatcgacatcgaccacgaaaaggccagcgcc
ttcggggtctccatcgccgacatcaacaccacgctgcagaccgcctggggctcctcctat
gtgaatgacttcttgcacgatggacgcatcaaaaaggtctacatgcagggagacgcgcca
taccggatgaacccatcagacgtagaattctggcacgtccgtaatgcggctggcgagatg
gtcccgttcggatcgttttcaagcggccgttggagctacggttcaccaaagctcgaacgg
ttcaacggtatctcatcggtcaacatccagggagccccggcacccggcgtcagctctggc
gatgccatggccaccatatccagaatggcggaaaaactgcccgaaggattcggtatcgaa
tggaccgggctctcctacgaagagcgtgccgccggccagcagacgctgctgctttactcg
atctccctgctcttcgttttcctgtgccttgccgccctgtatgagagctggagcgtcccg
ctcgccgtcatgctggtggtaccgcttggcgtcctgggcgcggttctggcgaccttcatc
gcaggcctgtctaacgacgtctatttcaaggtcggccttctgacgaccgtcggcctcacg
gccaaaaacgcgatcctcatcgtcgagttcgccaaaaccctctacgacaacggtatgccg
ctgaaagaagctgcactgagcgctgccggccagaggctccgccccatcgtcatgacctcc
atggccttcatcctgggcgtcacgccactcgcgttctcatcaggagcaggttcggcgagc
cagcacgccatcggcatcggcgtaatgggcggcatgttttccggaacggtgctggcgatc
tttttcgtcccgctgttctacatcctcgtacaatcccggtttaccaggaaacccgccacc
gatatggcagcaaaccaaaacataaaaggctcgaacgatgaacagtaa
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