Chlamydotis macqueenii (Macqueen's bustard): 104473297
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Entry
104473297 CDS
T08437
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04622
RIG-I-like receptor signaling pathway
cmac04623
Cytosolic DNA-sensing pathway
cmac05164
Influenza A
cmac05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104473297 (DDX58)
04623 Cytosolic DNA-sensing pathway
104473297 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104473297 (DDX58)
05168 Herpes simplex virus 1 infection
104473297 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmac04054
]
104473297 (DDX58)
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104473297 (DDX58)
Pattern recognition receptors [BR:
cmac04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104473297 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
CARD_2
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
104473297
NCBI-ProteinID:
XP_010122173
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MLEVDPVLLMPYINTCLIERECNEILQICEYRSKAAGITKLIECLCRSDKENWPKSLQLA
LDNEGYYNASELWNMREDNGKDVDSEMTDVSENSFETTMTFSEEAECDNNLSANLRSASE
GINQSSPVYEPKKARSYQTELARPAINGKNTLICAPTGSGKTFVALLICEHHFQNMPAGQ
KAKVVFLATKLPVYEQQKNVFKQHFERNGYSVQGISGETVANVSVEKVVQDSDIIVMTPQ
ILVNSIEEGILSSLSIFTLMIFDECHNTTGNHPYSVLMTRYLEQKFDSSANKLPQIVGLT
ASVGVGNAKSINETIEHICMLCSYLDIQAISTVRENKEDLQRFGNKPETYVRWVKMRARN
HFADIISDLMTETEALIRKIYSVDTISPMNKNDFGTQKYEHWIITTQKKCRLLQLADKEK
ESSICRDLFICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKRLTARF
QEKESELIALSKDESNENPKLEELACILDEAHRYNPQTRTLLFAKTRALVAALKKWIEAN
PLLSHIKPDVLMGRGKRDQKAGMTLPMQKGVLDAFKTNEDSRLLIATSVADEGIDISECN
LVVLYEYFGNVTKMIQVRGRGRAKGSKCILVTSKTEVVENEKHNRYKEEMMNEAIEKLQN
WDETTFTRKIYDLQMKEKVLQDFRKKETRPKLEEGKKNLLCGKCKVYACSTDDIRVIKES
HHIVLGDAFKERYITKPSKKLVQFDCFEKKSKMHCQNTNCQHDWGIIVKYKTFDNLPVIK
IKSFVVENVETGTQMDFQKWRNINFSLKNFDVEEMSR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgctagaagttgatccggtactgctcatgccctacataaacacatgcctgatagaaagg
gagtgtaatgagatcctccagatttgcgaatacagaagcaaagcagccgggataactaaa
ctcatcgaatgtctctgtcgatccgataaggaaaactggccaaaaagccttcaactggca
ctagataatgaaggatattacaatgcaagtgaactgtggaatatgagagaagataatggc
aaagatgttgatagtgaaatgacagatgtctctgagaacagctttgaaaccacgatgaca
ttttctgaagaagcagaatgtgacaataatctcagtgcaaatctccgttcagcttcagaa
ggaatcaatcagtcttcacctgtttatgaaccgaagaaggctcggagctaccagactgaa
cttgcacggcctgctatcaatgggaaaaacacattgatatgtgcccccacaggatctgga
aaaacttttgtggcacttctgatttgcgagcaccatttccaaaacatgcccgcaggacaa
aaggcgaaagttgtttttcttgcaactaaactgccagtgtacgaacaacagaaaaatgta
ttcaagcagcattttgaaagaaatggatattctgttcaaggaattagtggtgaaacagtt
gcaaatgtctctgtagaaaaggttgtacaggacagtgacatcattgtgatgacaccccag
attcttgtgaatagcatcgaggaagggatccttagctccctttccatcttcactctgatg
atatttgatgagtgccacaacactacaggcaaccacccttatagtgtgttaatgaccaga
tacctggaacaaaaatttgactcctctgcaaacaagctgcctcagattgtaggtttaact
gcttctgttggagttggtaacgccaagagcatcaacgaaacaatagagcatatctgtatg
ctctgctcctaccttgacatacaggctatatctactgtcagagagaacaaagaggatctc
cagagatttggaaacaagccagaaacatatgtcagatgggttaaaatgcgagctcggaat
cactttgcagacattatctcagatctgatgactgagacagaggcgttgataaggaagatt
tactcagtggatactatctctccaatgaacaagaatgattttggaacacagaaatatgaa
cactggataattaccactcagaagaaatgcagactgttgcaactggcagataaggagaaa
gagagcagcatttgtagagaccttttcatttgcactgaacacctgcggaaattcaatgat
gctcttatcatcagtgaagatgcccgcattgaagacgctttggcctacctaactgaattt
ttcacaaatgtaaaaaatggaccatatacagagttagagaagcgactgacagccagattt
caagagaaagaatcagaactcattgccctctcaaaagatgaatcaaatgagaatcccaag
ctggaagagcttgcttgcatcctggatgaagcacacagatataacccacagactcgcact
cttctctttgctaagacaagagccttagtagctgctttgaagaagtggatagaagcaaac
cctctgcttagccacataaagccagatgtgttgatgggtcgtggaaaaagagatcaaaaa
gcaggtatgaccctcccaatgcagaagggtgtactggatgcattcaaaaccaatgaagac
agcagactgctaattgctacatctgttgctgacgaaggcattgatatttctgagtgcaac
cttgttgtgctctatgaatactttggtaatgtcaccaaaatgattcaagtcagaggtcgt
ggaagggcaaaaggcagcaagtgcatccttgtgacaagcaaaacagaagtggttgaaaat
gagaaacacaaccgttacaaggaagaaatgatgaatgaagctattgaaaaactacagaat
tgggatgaaacaacatttacaagaaagatatatgacctgcaaatgaaggaaaaggtatta
caagacttcagaaagaaagaaacaagacctaagttagaggaagggaaaaaaaatcttctg
tgtggaaaatgcaaagtatatgcctgcagtacagatgacatcagagttataaaggaatct
catcacattgtcctaggcgacgcgttcaaggagcgttacataacaaagccttccaagaaa
ctcgtccaatttgattgttttgagaaaaaaagcaagatgcattgccaaaatactaattgc
cagcatgactggggaatcatagtgaagtacaagacatttgataatctaccagtgatcaaa
atcaaaagctttgtagtagaaaatgttgaaactgggacacaaatggattttcagaaatgg
agaaatattaatttttctttgaagaattttgatgttgaagaaatgtcccgctga
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integrated database retrieval system
