Chlamydotis macqueenii (Macqueen's bustard): 104478885
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Entry
104478885 CDS
T08437
Symbol
PRKDC
Name
(RefSeq) DNA-dependent protein kinase catalytic subunit
KO
K06642
DNA-dependent protein kinase catalytic subunit [EC:
2.7.11.1
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03450
Non-homologous end-joining
cmac04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104478885 (PRKDC)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104478885 (PRKDC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmac01001
]
104478885 (PRKDC)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmac03032
]
104478885 (PRKDC)
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104478885 (PRKDC)
Enzymes [BR:
cmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104478885 (PRKDC)
Protein kinases [BR:
cmac01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104478885 (PRKDC)
DNA replication proteins [BR:
cmac03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104478885 (PRKDC)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104478885 (PRKDC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNAPKcs_CC1-2
DNA-PKcs_N
DNAPKcs_CC5
DNAPKcs_CC3
FAT
Motif
Other DBs
NCBI-GeneID:
104478885
NCBI-ProteinID:
XP_010117680
LinkDB
All DBs
Position
Unknown
AA seq
3108 aa
AA seq
DB search
LHLSLVFSPEQGLLLFIHRSLSIEEFRDCREEALKFLCVFMEKVGDKVHPYACSIKQTCI
SVYTKERAAKCKVPALELLIKLLQNLRRSPLMEEMKVGEIFNKFYGELATKSRVSDTVLE
KIYELLGVLAEVQPSDMINNSEKLFRAYLGELRTQMTSATRGPKLPVVVGCLKGLAALMY
NFTKSMDEDPQTAKEIFDFAMKAINPQVDQKRYAVHVAGLQLFSWHAAQFGTLLLDNYVT
LFEAMCKWCGHTNQELKKASHAALDSFLKQISLMVAKDAELHKSKLQFFMEQFYGIIRRM
DSSSKELSIAIRGYGLFAAPCKAIHSKDVDDMYVELLQRCKQMYLTEAETIDDHLYQLPS
FLQSIASVIFLIDTIPEVYTPVLEHLVVLQINSFPQYSEKMQLVCCRSIIKVFLALSGKG
PVLWSFISTVVHQGLIRIFSKPITFSKEFFGKETSGSEDSREAGEVRTGRWKVPTCKDYL
YLFRSLLSCDTIKECVFEDENFFMANTTLQSLNRLLYDELIKSILKIIEKLDLTVQKLYV
SEQDENETDSALIGPSSDPASNLQPTKPTDFIAFINLVEFCREILPEKHVEYFNPWVYSF
VYELIIHSTRLPLISGFYKLLSVTMKIAKKIKYFEGVSPRSLRKCPEDPEKRSCFALFVK
FGKEVAAKMKQYKDELLASCLTFLLSLPHDIIMLDIKAYIPALQNAFKLGLSCTPMADLG
LDALEDWSAHIPRHIMQPYYKDVLPLLDGYLKNSTSTVESQNNWEIRKLSRAAQKGFNKV
VIQRIRKAKTSSWDDSPSLEAVRARVARLLGSLGGQISHNLITATSAEEMMKKCVSWDTE
KRLSFAVPFADMKPVIYLDLFLPRVTELALSASDRQTKVAACELLHSIVTYMLGKASQMP
EGRQGPPPMYQLHKRVFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVVF
LEAILSGIVDPVDSTLRDFCGQCVREFLKWSIKQTTPRQQEKSPANTKSLFKRLYSLALH
PSAFKRLGAALAFNSIYREFREENSLVEQFVFEALVVFLESLALTHTDEKSLGTTQQCCD
TINHLKRIIKHKAPSLNREGKRRVPRGFPATKSVCLLDIVMWLLVQCGRPQTECRHKAME
LFYEFVPLLPGNKSPSSWLADVLKKQDVSFLINKFEGGGSDAESPSGILSQPTLRGMQEP
FSLQTVMRWMDMFLAALDCYNTFFELRMIKPHEILGVNERSSFLEAVQFFLETIALHDIH
AAEQWFDCSSKGSVFSPQERDVYNYSKCTIIVRIMEFVTMILETCQQDFWKLLEKKLLNA
SLIELLVTTVCDPSHVGFNTADVQVMKNLPDIAVRLMKALMKSPYEESLKRCIKKRITPQ
SLEDLCSVDLFNSDARFDQVKVSAVLSACKQLQKSGLLHSILHDQDEGHHGSVGSKLLLV
VYKGIALRGERISLPSLDISSKRLADGLLQLAFAIGDQCEELVSLLLNTVVLSVPLSGAS
QKNLINFSHGQYFYSLFSETINQQLLKNLDVIIVQLMESSVSNPQMVGSVLNGMLDQSFR
ERTVRKQQGVKLVTAVLRNWKRLDSWWAKGSAPESKMAVLTLLAKVLQIDSSVSFNTNHE
AFTAVFNTYTSLLTDQNLGLNLKGQAVIILPFFTNLTGEELSDLKDALDQLVAFNFPMRS
DEFPKGTLKHNNYVDCTKKFLDALELSQSPMLLQLMTEVLCRDHRHFMEDLFQASFKRIS
RRSTTDKQVTLLDTVHKMFQSEDLLSNTTRQAFMDRSLLTLLWHCSLDALREFFGKIIVQ
AMDTLNSRFTKSNEYTFDTQVTKKMGYYKLLEVMYVRLSKEDVYSKDSKINQAYRGSMNV
EGNELTKTLIKSCYDAFTENMAGESQLLEKRRQYHCAAYNCAIAVISCVFTESKFYQGFL
FTEKSEKNLLIFENLIDLKRQYTFPVEIEVPLERKKRYIAIRKEARNAGNSDQDEPKYLA
SASYMMDSSLSEEMSQFDFSTGVQGFSYNSQDVTATSTRFRRKEPTEYMALNDEMELEMD
ELNQHECMATMTTLIKHMQRNQITPKVEEAIPVDLPLWMKFLHGKLGNPSVPLNIRLFIA
KLIVNTEDVFRPYAKQWLGPLLQLVVSGNNGGEGIHYMVVEIVVTILSWTSVATPKGNIK
DEILANRLLEFLMKNAFHQKRAVFRHNLEIIKTVVECWKNSLSIPYNLIFEKFSSGDPDT
KDNSVGIQLLGIVLANNLPPFDPKCEIDRVRYFQALISNMGLLKYKEVYAAAAEVLGLAL
QSIAERENVLEDPVYDCVIRQLKHHQNTQQDKFIQCLNKVVKNFPPLADRFMNAVFFLIP
KLHGVMKTYCLEVILSRAEEIPDLHLQLKSKEFIQIMNHRDDERQRVCLDIVYKMLSKLK
PLELKELLPGVTGFISHPSVICRQRMYDILMWIYDNYSDPESQADGDSQEILKLAKEMLL
QGLIDENAELQLIVRNFWSDETRLPTNILDRMLSLLNSLYSAKIETQYLSLITNFLLEMT
SKSPDYSRKIFEHPLSECKFQDFVIDSSWRYRSTMLTPLFVETQASQSTQRNFSQERSLS
ASGSVGGRVRATQRQYEFTPTQHVSGRSSFNWLTGSSIDTLAEYTVPSSSESLSSSMLLV
NKRSEKFKQATFKPVGPDFGKKRLGLPGDEVDSKTKGIEERGEILRLRRRFLKDQEKLSL
IYARKGVAEQKREKEMKSELKMKYDAQVTLYRSYRVGDLPDIQIEYCSLIAPLQGLAQKD
PTFAKQLFTSLFGGIFHEVEKSKTPSEKKAIIQKLLNDFNNFLSMSLSYFPPFIACIQEM
SYRHRELLELDSANVSTSCLASLQQPVGILLLEHALMALNPVEEPPTKRMRGRTQLPPDV
IRWIELAKLYRSLGDYDVLRGIFSGKIGTKEITQKALLAEARSDYAEAAKYYDEALSKED
WQDGEPTEAEKDFWELASLECYDHLTEWKSLEYCATVNIDSGKPPDLSKTWNDPFFQETY
LPYIIRSKLKLLLNGENDQTLLTFIDEAMKTEQKKAIIEMHYSQELSLLYILQDDFDRAE
YYISNGMQIFMQSYSSIDTLLYQSRMTKLQSVQALTEIQDFINFMTKR
NT seq
9327 nt
NT seq
+upstream
nt +downstream
nt
ccctgcacctctccctggtgttctccccagagcagggcttgctcctcttcatccacagat
ccctcagcatcgaggagtttcgagattgcagggaagaagcgttgaagtttctttgtgtct
ttatggaaaaagttggtgacaaggttcatccttacgcctgtagcattaagcaaacttgta
ttagcgtttatacaaaagagagggcagcaaaatgtaaagtcccagctctggaacttctga
taaagttgctccaaaatttacgacgttcccctctgatggaagaaatgaaagttggggaga
tatttaataaattttatggggaacttgccacgaaaagtagagttagtgatacagtactgg
agaagatttatgagcttttgggagttttggcagaggtccagcctagtgacatgattaaca
actctgaaaaactattccgagcttatctgggagagcttagaacacagatgacatcagcta
caaggggacccaagctgcctgttgtagtaggatgtctgaagggactggctgcactcatgt
acaactttaccaaatctatggatgaagatcctcagactgcaaaggagatttttgattttg
caatgaaggcaatcaacccacaggttgatcagaagcgatacgcagtacatgtagctggtt
tacagttgttcagctggcatgctgctcagtttggtaccttgctcctggacaactatgtta
ccctctttgaagcgatgtgtaaatggtgtggccacacaaatcaggagctgaagaaagcca
gtcatgctgcactagattcattcctcaagcagatttctttaatggtagctaaggatgcag
agctacacaagagcaagttgcagttcttcatggagcagttctatgggatcatcagaagaa
tggattcgagcagcaaagagttgtccattgccattcgcggatacggactttttgcagcac
cctgtaaagctatacattctaaggatgttgacgacatgtacgttgagctccttcagcgtt
gtaagcaaatgtacctcacagaagcagaaacaatagatgaccatctgtatcagctaccaa
gtttccttcagtccattgcaagtgtgatattccttatagatacaattcctgaagtatata
ctccggttcttgaacatctagttgtgctgcagatcaatagctttccacaatacagtgaaa
aaatgcagttagtctgttgcagatctataataaaggtatttctagccctctcaggaaaag
gtccagttctctggagttttatcagcactgtggtgcatcagggattaattagaatcttct
ccaagccaatcacattttcaaaggaattttttggaaaagaaacttctggatcagaagact
cccgtgaagctggagaggttaggacagggagatggaaagtaccaacatgtaaggactatc
tgtatctctttagaagtctactgagctgtgacacaataaaggaatgtgtttttgaagatg
aaaacttctttatggcaaatacaacgctgcagtccctgaatcgtttgctatatgatgaac
ttataaaatctattttgaagattattgaaaagttggacctgactgttcagaaactgtatg
ttagtgaacaggatgaaaatgaaactgacagtgctttgattgggccttcttctgaccctg
cttcaaaccttcagccaacaaagccaacagactttattgcctttataaatctagtggaat
tctgcagagagatacttccagagaagcatgttgagtactttaacccttgggtatattcct
ttgtttatgagcttattatacattcaacgagactacctcttattagtggattctacaagc
tgctttctgttacaatgaaaattgccaagaaaataaaatactttgagggtgtcagtccaa
ggagtctcagaaaatgtcctgaagacccagaaaagaggtcttgctttgcactgtttgtaa
agtttggaaaagaggttgcagcaaaaatgaaacagtataaggatgagttgttggcatcct
gtctgacctttttgctctctttaccacatgacatcatcatgcttgatatcaaagcatata
ttcctgcattacagaatgcatttaagctgggccttagctgtaccccgatggctgatctgg
gactggatgctttggaagactggtcagctcacatccccagacatataatgcaaccttact
acaaggatgttctgcctcttcttgatggttatttgaaaaactctacgtctacagttgaat
cccagaataactgggaaataaggaaactttctcgagcagcccagaagggatttaacaaag
ttgtgatacagcgtataagaaaggcaaagacttcttcatgggatgacagtccctctttgg
aagcagtaagggctagagtggcacgccttcttggatctttgggaggacagatcagccaca
acttaattacagctacctctgcagaggagatgatgaagaaatgtgtgtcctgggacactg
agaagcgtctgagctttgcggtaccatttgcggatatgaagcctgtcatctacttggatt
tattcttgcctcgtgtgactgagctggcactttctgcaagtgacagacaaacaaaagttg
cagcatgtgagttgctacatagcatagtcacatatatgttggggaaagcatctcaaatgc
cagaaggacgtcagggtcctccacccatgtatcagttacataagcgagtatttccagtac
tgcttcgtcttgcttgtgatgtagaccaggtgacaagacagttgtatgagcctttagtca
tgcaacttattcactggtttacgaacaacaaaaaatttgagagtcaagatacagtggtgt
tcctggaagctatcttgagtggcatagtggatccagttgacagcaccttgagagatttct
gtggtcagtgcgtacgagaatttttgaaatggtctattaagcagacaacaccgaggcagc
aggagaaaagcccagcaaataccaagtctctttttaaacggttgtatagtcttgctcttc
atcccagtgctttcaagagactgggtgcagcacttgcttttaacagcatctacagagaat
ttagggaagaaaattctctggtggagcagtttgtatttgaagcattggttgtatttctgg
aaagtctagccttaacccatacagatgaaaaatcattaggtaccactcaacaatgttgtg
atactattaatcacctgaaacgcataatcaagcataaagcgccttctctgaacagggaag
gaaaacgccgagtaccacgaggatttccagctactaagtcagtgtgtcttctggacattg
tcatgtggctcttagtgcagtgtggacgacctcagacagagtgccgacataaagccatgg
agctcttctatgaatttgttcctttgttaccaggaaacaagtctccgtcttcttggttgg
ctgatgttctcaagaaacaagatgtttctttcctcattaacaaatttgaaggaggtggca
gcgatgccgaaagtccatctgggatcctttctcaaccaactctccgtggtatgcaggagc
ccttcagtttacagactgtcatgcggtggatggatatgttcttagcagcgctggactgct
acaatacattctttgagctgcgaatgatcaaacctcatgaaatactaggtgtaaatgaaa
gatcctcattcttggaagctgtgcagttcttccttgaaactattgctttgcatgatatcc
acgcagcagagcagtggtttgattgcagttcaaaagggagtgtgttcagtccacaagaga
gagatgtgtataattacagcaagtgtacaattatagtccgaatcatggagtttgtcacca
tgatactggaaacatgccagcaggatttctggaagctacttgagaagaaattgcttaatg
caagccttatagagcttctggtgacgacagtgtgtgatccatcacatgtaggctttaaca
ctgctgatgtgcaagtcatgaaaaatctcccggatatcgcagtaagactcatgaaagctt
tgatgaaatctccctatgaagaatctttgaaacggtgcataaaaaaaagaatcacaccgc
agagccttgaggacctttgttctgttgatctgtttaattcagatgcacgttttgatcaag
ttaaagttagtgccgtcctttctgcctgcaagcaactacagaaatctggcctgcttcatt
ctattcttcatgatcaggatgaaggacatcatggctcagttggctctaagcttcttttgg
ttgtttataaaggtattgcacttagaggtgaaaggatctctcttccatcgttagacatca
gcagtaagcgattagctgatgggctcctgcagctggcttttgctattggtgaccagtgtg
aggagctagtaagtctgctgttgaacacagtggtgttatctgtgccgttatcaggagcat
cccagaagaacctgatcaatttctcccatggacagtatttctacagcctgttctcagaaa
ccatcaatcaacagctgctgaaaaacctggatgtgatcatagttcaacttatggaatcat
ctgtcagcaatccccaaatggttggtagcgttttgaatggcatgttagatcagagtttta
gggagcgtactgtacgcaagcagcaaggagtgaaactggtcacagctgtactacggaact
ggaagagacttgacagctggtgggccaaaggttcagctcccgagagcaaaatggcagtct
tgaccctgctggcaaaagttctccagatagactcttcagtttctttcaataccaatcatg
aagcatttacagctgtttttaatacctataccagtctacttactgatcagaatttaggct
taaatcttaagggccaagcagtgataattctcccattcttcactaatttgactggagaag
aacttagtgaccttaaagatgctcttgatcaacttgtagcttttaattttccaatgaggt
ctgatgagtttcccaagggaaccttgaagcacaataactatgtagactgcactaagaaat
ttttagatgcattagaattgtctcagagtccaatgttgttgcagttgatgacagaagtcc
tctgtagggaccacagacatttcatggaggacttatttcaagccagcttcaaaagaattt
ccagaaggagcaccactgacaaacaagtgacactgttggacactgttcacaaaatgttcc
agagtgaagaccttctttcaaatactactcgtcaagcatttatggatcgctccctcctca
ctctcttgtggcactgcagcttggatgcactgagagaattctttggcaagattatagtac
aggctatggatacacttaattccagatttacaaagtccaatgaatatacttttgatacac
aagtcaccaagaaaatggggtattacaagctgctagaagtgatgtatgtgcgtctttcaa
aagaggatgtgtactccaaggactctaaaattaaccaagcttaccgtggctccatgaatg
tagaaggaaatgaacttaccaagacactaataaagtcatgctatgatgcatttacagaaa
acatggcaggagagagtcagctgttggagaagagaagacagtatcactgtgcggcgtata
attgtgctattgctgtaatcagttgtgtcttcactgaaagtaaattttatcaaggttttc
ttttcacagaaaaatcagaaaagaacttgctgatttttgaaaatttgatagacctgaagc
gtcagtatacatttcctgtagaaattgaggtgcctctggaaaggaagaagcggtatattg
ctattagaaaggaggccaggaatgcagggaatagcgatcaggatgaacccaagtatttag
cttctgcatcttatatgatggatagcagtttgagtgaagaaatgagtcagtttgattttt
ctactggagtccaaggtttttcttataactcccaagatgttacagctaccagcactcgtt
tcaggagaaaggagcccacagaatacatggctttaaatgatgaaatggagctggaaatgg
atgaactcaaccaacatgaatgtatggctactatgaccactctgattaaacatatgcaga
ggaaccagatcacacccaaagtggaggaggccattccagtagatcttcctctttggatga
aatttctgcatggcaaattaggaaacccatcagtaccactaaatattcgcctcttcatag
caaaacttattgttaatactgaagatgttttccgtccgtatgcaaagcagtggcttggtc
cattgctgcagcttgttgtttctgggaacaatggaggtgaagggattcattatatggttg
tggaaatagtagttactatcctttcctggaccagtgtagccactcccaaagggaatatta
aggatgagattttagcaaacagattacttgaattcttgatgaagaatgcctttcaccaaa
aaagagctgtattcagacacaatctggaaatcataaagacagttgtagagtgttggaaaa
actcactctccataccttacaatttaatatttgaaaaattttctagtggagaccctgata
caaaggacaactcagtgggaattcagctgctgggaattgttcttgctaacaatttacctc
cttttgacccaaagtgtgaaatagatcgtgtcaggtattttcaggctttgatcagcaaca
tgggcttattgaagtataaagaagtttatgcagctgcagcagaagtgttgggacttgctc
ttcagtccattgctgagagagaaaatgtacttgaagatccagtttatgattgcgtcataa
gacagttgaaacatcatcagaacacccaacaggataagtttattcaatgcttgaataaag
ttgttaagaattttccacctcttgctgacaggtttatgaatgcagtattctttttgatac
ccaaacttcatggtgtgatgaagacctactgcctggaagtaatactgagccgggcggaag
aaatacccgatctccacttgcagttaaaaagtaaagaatttatccagatcatgaatcaca
gggatgatgaaaggcaaagagtttgtttggatatagtgtacaagatgctgtctaaactaa
aaccactggaacttaaagaacttcttcctggagtgacagggttcatttctcacccttctg
taatatgtcgacagcgcatgtatgatattttgatgtggatttatgataattacagtgatc
cagaaagccaagcagatggtgattctcaagaaatactcaaactggcaaaagaaatgctgc
ttcaaggactaattgatgagaatgctgaactgcaattaattgttaggaatttttggagtg
atgagacaaggttacccacaaacattcttgatcgcatgctgtcactgttaaattctttat
attctgccaagattgaaacgcagtacttgagtctaatcacaaattttctgcttgaaatga
ccagcaagagcccggattattccagaaaaatatttgaacatccactgtctgaatgcaaat
ttcaggactttgtaattgattccagctggcgttatcgaagtaccatgctcacacctttgt
ttgtggagactcaagcttctcagagtacccaaaggaatttttcacaagaaagatctcttt
ctgcctctgggtcagtcggtggtcgagtgagggctacccaacggcaatatgaatttacac
ctacacagcatgtcagtggtagaagttcttttaattggctaactggaagtagcattgaca
cattggcagagtatacagttccttcatcctctgaatccttgtcttcgtcgatgcttttgg
ttaacaaacggagtgaaaaatttaaacaagcaacctttaaaccagtggggccggattttg
ggaaaaaaaggttaggtttgcctggagatgaggtggacagcaaaactaaaggtatagaag
aacgaggagaaattctaaggctgcggaggcgtttcttgaaggaccaagagaaactcagtc
tgatttatgctagaaaaggtgtggctgaacagaaaagagagaaggagatgaaatctgagc
tgaagatgaagtatgatgcccaggttactttgtacagaagttaccgagtaggagaccttc
ctgacatccagattgagtactgcagtctcattgcccctctgcagggccttgcccagaaag
atccaacatttgccaagcagcttttcaccagtttatttggtggaatttttcatgaggtag
aaaaatctaaaactccttctgagaaaaaagccatcatccagaagctgctgaatgacttca
ataatttcctgagtatgagcctgtcttacttcccaccattcattgcgtgcatccaggaaa
tgagttaccggcacagagagctgctagaactggattcagctaatgtgagcacgagctgcc
ttgcaagcctacagcagccagtgggcatccttcttctggagcatgccctgatggctctga
atcctgtggaggagcccccgaccaagcggatgcgtggcaggacacagcttcctccagatg
ttatcagatggattgaacttgctaagctctaccgatctctcggggattatgatgtccttc
gtggcattttcagtggtaagattgggactaaggaaattacacagaaagcattgttggcag
aagcaaggagtgattatgctgaagcagctaaatattacgatgaggcactctctaaagaag
actggcaagatggagagccaacagaagcggagaaggacttctgggaacttgcatctctgg
aatgctatgaccacctcacagagtggaagtctctggagtattgtgctaccgttaatattg
atagtggaaaacctccggatttaagcaaaacatggaatgatccattttttcaggagacat
atctgccctatataatacgcagtaagttgaagttactgctcaatggggaaaatgaccaga
ctttactaacttttattgatgaggcaatgaagacagaacagaagaaagccattatcgaaa
tgcattacagccaagagcttagtctcctttacatcctgcaagatgattttgacagagctg
aatattacattagcaatggcatgcagatcttcatgcagagctattccagcattgatactt
tgttgtaccaaagtcgaatgaccaaactgcagtctgtacaagctttgacggaaatacagg
atttcatcaattttatgaccaagagaa
DBGET
integrated database retrieval system
