Chlamydotis macqueenii (Macqueen's bustard): 104487009
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Entry
104487009 CDS
T08437
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104487009 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104487009 (EFTUD2)
Spliceosome [BR:
cmac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104487009 (EFTUD2)
Complex C
U5 SnRNP specific factors
104487009 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
104487009
NCBI-ProteinID:
XP_010128160
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
STLVPEAAKCERWLQLEDDDDDDDMGDHDDDHPGMEVVLHEDKKYYPTAEEIYGPEVETI
VQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHH
GKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLF
NIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKI
DRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTL
GSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKI
LAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPS
PKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGT
IHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIV
KTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTK
VEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPN
KKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDAT
GPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEP
LHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQD
APIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRP
LEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
agcactttggtgccggaagcagctaaatgtgagcgttggttgcagctcgaggatgatgac
gacgatgacgatatgggggaccatgatgacgaccaccctgggatggaggtggtgctgcac
gaggataagaaatactatcccaccgccgaggagatctacgggcccgaagtagagacgatc
gtgcaggaggaagacacgcagcccctcactgagcctattattaaacctgtgaaaaccaaa
aaattctctctgatggagcagacgttaccggtcacggtctacgagatggatttcctggca
gatctgatggacaactcggagctaattcggaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgttgactgcctgatagaacagacgcacccagaaatccggaagcgc
tacgaccaggatctttgctacactgatatattgttcacagagcaggagaggggagtaggg
atcaagagcacaccagtgactattgttctgcctgacaccaaaggaaagtcctttctcttc
aacatcatcgacactccaggtcacgtcaatttttctgatgaggtgacggctggccttcgt
atttcggacggtgttgtgcttttcattgatgcagctgaaggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaaggctcgcggtgaccgtgtgcatcaacaagata
gaccggctgatcctggagctgaagttaccccctacggatgcttactacaaactccgccat
atcgtagacgaagttaatggtctgatcagcatgtattccactgacgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcgcagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattaccaagagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggagacgtggacacgaccctgcccaggactctggatgaacttggc
atccacttgaccaaagaggaattgaaactgaacattcggccgctcctgcggcttgtctgc
aagaagttctttggggaattcactggctttgtggacatgtgtgtgcagcacatcccctcc
ccaaaggtgggagccaagacgaaaatcgagcatacctacactggtggcgtcgactctgac
ctaggggaggccatgagtgaatgcgaccctgatggtccactgatgtgtcacacaacgaaa
atgtacagcacagacgacggcgttcagttccacgcctttggcagagtgctcagtggtacc
atccacgctgggcagcctgtgaaggtcctcggagaaaactacaccctggaagatgaggag
gattcccaaatctgcaccgtcggacgcctctggatctcggttgcaaggtaccacattgag
gtcaaccgggttcctgctggcaactgggtgctgatagaaggagtagaccagcccatagtg
aagactgcaactgtcacggagcctcggggcaatgaggaggctcagatcttccgtcctttg
aagttcaacaccacatctgtcatcaaaatagctgtagagccggtcaacccctcggagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccctcgcttactactaag
gtggaagagtctggggagcacgtgatcctggggacgggggagctttacctggattgcgtg
atgcacgacctgcggaagatgtattcagagattgatatcaaggtcgccgatccagttgtc
acgttctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcctctggagaaggggcttgcggaggacatt
gaaaatgaagtggtccagataacgtggaacaggaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagacgccact
ggcccgaacatcctagtagacgatacgctgccctcagaggtggacaaatcactgctgggc
tccgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gacgaattgatccgcaacgtgaagtttaagatcctggatgcagtgatcgctcaggagccc
ttgcaccggggtggaggacagatcatcccgacggcccggagagtggtctattccgctttc
ctgatggccacccctcgcttgatggagccgtactacttcgtggaggtgcaggctcctgct
gactgcgtgtctgcagtgtacacagttctggccaggcgcagaggccatgtgacgcaagat
gctccaatcccaggctcccctctttacaccatcaaagccttcatcccagccattgattcc
tttgggtttgagacagacttgaggacccacacgcagggacaagccttctcgctctctgtc
ttccaccactggcagattgtacctggtgaccccttggacaagagcatcgtcatccgcccc
ttggagccccagcctgccccgcatctggccagagagttcatgatcaagaccaggcgcagg
aagggcttgagcgaggacgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
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