Clostridium manihotivorum: C1I91_05730 Help Entry C1I91_05730       CDS       T08006                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cmah  Clostridium manihotivorum Pathway cmah03030   DNA replication cmah03410   Base excision repair cmah03420   Nucleotide excision repair cmah03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cmah00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C1I91_05730    03410 Base excision repair     C1I91_05730    03420 Nucleotide excision repair     C1I91_05730    03430 Mismatch repair     C1I91_05730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cmah03032]     C1I91_05730    03400 DNA repair and recombination proteins [BR:cmah03400]     C1I91_05730 Enzymes [BR:cmah01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C1I91_05730 DNA replication proteins [BR:cmah03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C1I91_05730 DNA repair and recombination proteins [BR:cmah03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C1I91_05730    NER (nucleotide excision repair)     GGR (global genome repair) factors      C1I91_05730    MMR (mismatch excision repair)     DNA ligase      C1I91_05730   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C1I91_05730 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT 5_3_exonuc HHH DNA_ligase_ZBD BRCT_2 HHH_3 DUF669 Zn_ribbon_PADR1 Nlig-Ia ILEI POLH-Rev1_HhH DUF3047 RNA_pol_A_CTD Motif Other DBs NCBI-ProteinID:  QAA31203 UniProt:  A0A410DPT1 LinkDB All DBs Position 1305406..1307400 Genome browser AA seq 664 aa AA seqDB search MDKIKRIEELVEELNKYAYEYYTLSNPSVSDKDYDRKYDELLTLEKETSYVLPYSPTQRV GDTALAEFSKYTHKARLWSLDKAQTLEELKEWHNRNVKFVEDYNRSHEDKLPVLRYIVTK KFDGLTINCTYDVNGVLTKAATRGTGEIGEDVTAQAKTIKSLPLKINCSDVLEIHGEAIM TKEAFDRYNEVSEVPLKNLRNGAAGALRNLNIKETAKRNLSAFFYDVGYKEGTPFSSYEE MMNFIKEKGFPIDEYMKICHTMEDIEREIEYIKDIRFELNYDIDGAVVAIDDMRTRELLG YTIKFPKWAIAFKFEAQEATTKLLDVEWNVGRSGRVSPTALLEPVELAGVTVKRATLNNM DDVRRKGVLIGAEVFVRRSNDVIPEIMGVAGEPGEDTREIVPPETCPACGSHIVLNGAHY FCENTLSCKPQMVKTIVHYASREAMNIEGFSEKTAEQLFEKLEIKSITELYKLEKESLLT LEKFGEKKAQNLLNAIESSKDCQLHSFIYALGIPNVGVKTAKDLVKRFKNIDNLEKATYE ELISVSDIGGIVAKSIIDFFSEEKVIATINELLELGVTPKYEENEVKENPFEGKTVVVTG SLASYSRTEIKEKLESLGAKVSGSVSKKTDYVIVGEDAGSKYTKALELGLKILSEEDFNS LIGG NT seq 1995 nt NT seq  +upstreamnt  +downstreamnt atggataagattaaaagaatagaggagctagtagaagagctaaataaatatgcatatgaa tactataccctaagtaatccttctgtatcagataaggattatgataggaagtatgacgag ctgcttacattagaaaaagaaacttcttatgtattaccttattctcctactcaaagagtt ggagatactgctcttgcagagttttcaaaatatactcataaagctagattgtggagcttg gacaaggcgcagactttagaggaacttaaagaatggcataatagaaatgtgaagtttgtt gaggattataatagaagtcatgaagataaacttccggtactaagatatatagttactaaa aagtttgatggattgactataaattgtacctatgatgttaatggcgttcttacaaaagct gcaactagaggcactggagaaataggtgaggatgttactgcacaggctaaaaccataaaa tccttaccgcttaagattaactgcagtgatgttttggaaatccatggtgaagcaataatg actaaggaagcctttgatagatacaatgaagtttcagaggtaccgttaaaaaaccttagg aatggtgcagcaggggcacttagaaatctaaatataaaagaaaccgcaaaaagaaatcta tctgctttcttttatgatgtaggatataaagaagggacaccttttagttcttatgaagaa atgatgaacttcataaaagagaaagggtttccaattgatgagtatatgaagatctgtcat actatggaagatatagagagagaaatcgagtatataaaagatataagatttgagctaaat tatgatatagatggggccgttgttgctattgatgatatgaggactagagaactacttgga tatacaattaagtttcctaaatgggcgatagcttttaagtttgaagctcaagaagctaca acgaaacttctagatgtggaatggaacgttgggagaagtggaagagttagtcctacagca ttactagaaccggtagaactagctggcgtaactgtgaagagagcaaccttaaataatatg gatgatgtaagaaggaaaggtgtactaattggagcagaggtattcgttagaagatccaat gatgttattcctgagataatgggcgtagcaggagaacctggtgaagatactagagaaatt gttccaccagaaacatgtcctgcttgtggcagccatattgttttaaacggtgcacattat ttctgcgaaaatactctttcttgtaagcctcagatggttaagaccatagtacactatgca tctagagaagctatgaatatagaaggtttttcggaaaaaacagcggagcagttatttgaa aagctagagataaagtcaataacagagttatataaactggaaaaagaaagtctattaacc ttagaaaagtttggtgagaaaaaggcacaaaacttattaaatgccattgagagtagtaag gactgtcaactacattcctttatatatgcattgggaatacctaatgtaggagtaaagaca gctaaggatttggttaagagatttaagaacatagataatctagagaaggctacctatgag gagctgataagtgtcagtgatataggtggtattgtggcaaagagtataatcgactttttc tctgaagaaaaggttatagctacaataaatgaacttttagagcttggtgttactcctaaa tatgaggaaaatgaagttaaggaaaatccttttgaaggaaagactgttgtggttacaggt tctttagcttcttatagcagaactgagataaaggaaaagcttgagtctctaggggcaaaa gtctcaggtagtgtaagcaaaaaaactgactatgttatagttggcgaggatgctggatcc aagtacactaaagccttagagcttggattaaagatattatcagaagaagactttaatagt cttataggaggttag

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