KEGG   Cetorhinus maximus (basking shark): 144694580
Entry
144694580         CDS       T12026                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cmam  Cetorhinus maximus (basking shark)
Pathway
cmam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    144694580 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmam03041]
    144694580 (smndc1)
Spliceosome [BR:cmam03041]
 Complex A
  U2 snRNP components
   U2 related factors
    144694580 (smndc1)
 Complex B
    144694580 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    144694580 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SGF29_Tudor T3SS_needle_F DUF2067
Other DBs
NCBI-GeneID: 144694580
NCBI-ProteinID: XP_078421293
LinkDB
Position
20:complement(94084566..94106514)
AA seq 238 aa
MSDELAKQLASYKAQLQQVEAALSSDADNEDLLKLQKDLQEVIELTRDLLSNQPSVAAAN
ADSSTNSVPSHKWKTGDKCMAVWNEDGQLYEAEIEEIDQENGTAAITFSGYGNADVLPLV
NLKPVEEGNDSEEPGSDKPKSKKEMVAQQREYKKKKALKKAQRMKELEQEREEQKVKWQQ
FNNRAYSKNKKGQVKKSIFASPESVTGKVGVGTCGIADRPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagatgagctggcaaagcagctggccagttataaggcacaacttcaacaagtagaa
gctgcgctgtcttctgacgcagacaatgaagatctccttaaattacaaaaagatttgcag
gaagtaatagagctgaccagagacctgttgtcaaatcagccgtctgttgctgcagccaat
gctgacagctcaacgaattctgtgcccagtcataaatggaagactggtgacaagtgtatg
gccgtttggaatgaggatggacaattgtatgaagcggagattgaagagattgaccaggaa
aatggtacggctgccatcaccttttctggatacggtaatgctgatgtgctccccttggtc
aacttgaaacctgttgaagaaggaaatgattctgaagagccgggtagcgacaaacccaaa
tcaaagaaggaaatggtcgcccagcagagggaatataagaagaagaaagcattgaaaaag
gcccagagaatgaaggagcttgaacaggaacgagaggaacaaaaagtaaaatggcagcag
tttaataatagagcctattccaagaacaaaaaaggacaggtaaagaaaagcatttttgcc
tcaccagagagcgtgactggaaaagttggagttggcacatgtggaatagcagacagaccg
atgactcagtaccaagacacgtccaaatacaacgtgcggcatcttatgccacaataa

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