Colossoma macropomum (tambaqui): 118798268
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Entry
118798268 CDS
T09004
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118798268 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118798268 (nthl1)
Enzymes [BR:
cmao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
118798268 (nthl1)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118798268 (nthl1)
Prokaryotic type
118798268 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
118798268
NCBI-ProteinID:
XP_036413569
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MFCSLRFICMVKYSAVRMSSPYFNSKSTVRSCCSRDDPEARTSRKGGGIRGLKAKMGKGV
ERNRVRVKEETEEHRVSHTEGSPPTQAALGESAAEIKEGLRDGPAPLKSPRTPRRGHIKV
EYEEDGPRMKREPWEPHDWRKQLSFIREMRSGRDAPVDHMGANKCFDPQASPEVMRYQVL
VSLMLSSQTKDQVTAAAMQRLRTHGLTVATILKTDDDTLGKLIYPVGFWRTKVKYIKQAT
EMIRQEFGGDIPNTVEGLVRLPGVGPKMAHLAMAIAWNQVSGIGVDTHVHRICNRLGWTR
TKTKNPEETRQALEDWLPRDLWQEINLLLVGFGQQVCLPVGPLCSTCLNQHTCPSAHLTS
PNKRPKPGSPLSPGEPDTPVKNPKIKLESLTTQIKEEPANVPLTSACSQRRKAKRKNEAP
VEAKTPKEELTAVPLASDTKEQENEAQSKALAGPESDQPRRGKAKTRAPPTAGIKEEQKD
GPSSSRPRRRTRTVKH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttttgctcactccgtttcatttgcatggtcaagtactcggctgtaagaatgagctct
ccgtatttcaatagcaaaagtacagtccgctcatgctgctccagagatgatcctgaggcc
agaacttcacgtaaaggaggagggatcaggggattgaaagccaaaatgggtaaaggtgtg
gagagaaacagggtgcgagtgaaggaggaaaccgaggagcacagagtttctcacactgag
gggtctccacctacacaagctgcactaggagagtctgcagcagaaattaaggaaggcctt
agggacggacccgcacctttaaaatcgccacggacaccaaggaggggccatattaaagtg
gagtatgaggaagatggtcccagaatgaagagggaaccctgggagccacatgattggagg
aagcagctgtccttcatcagggagatgaggagtgggcgggatgctcctgtggaccacatg
ggcgcaaataaatgcttcgacccacaggcttcacccgaggtgatgcgctatcaggtgttg
gtgtctctgatgttgtccagtcagacgaaggaccaggtgaccgctgcagcgatgcagcgc
ctgcgcacgcacggcctcaccgtggccaccatcctcaaaacggacgatgacacactggga
aaattgatctaccccgtcgggttttggaggacaaaggtgaagtacataaagcaggcgacg
gagatgatccgtcaggagtttggtggagatattcccaacactgttgagggtttggtgcgt
ctgcccggtgtcggccccaagatggcccacctcgccatggccattgcctggaaccaagtc
tccggcattggagtggacacacatgtccatcgtatctgtaacagactgggatggactcgc
accaagaccaagaacccagaggagaccagacaggcactagaagactggttaccaagagat
ctgtggcaggagataaacttgctgctggtaggctttggacagcaggtgtgtttacctgtt
ggacctttgtgctctacctgtctaaaccagcacacctgtccttccgctcatctcacctca
cccaataaaaggcctaaacctggttctccgctctcacctggggagccggataccccagtg
aagaacccaaagatcaaactggaaagtctgaccacacagatcaaggaagaacccgccaac
gttcctcttacatcagcttgttcccaaaggagaaaggccaaacgcaaaaacgaggcacct
gtggaggcaaaaacacctaaagaagaactgacagctgttcctttggcttctgacactaaa
gaacaagaaaatgaagcacagtcaaaagccctggctgggcctgaatctgatcagccaaga
aggggaaaggcaaagacaagagcgccccctacagcagggattaaagaagaacagaaagac
ggaccttcatcttctcgtccgagacggagaactagaaccgttaagcactga
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