Colossoma macropomum (tambaqui): 118798907
Help
Entry
118798907 CDS
T09004
Symbol
tap1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao02010
ABC transporters
cmao04145
Phagosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118798907 (tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118798907 (tap1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118798907 (tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmao02000
]
118798907 (tap1)
Enzymes [BR:
cmao01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
118798907 (tap1)
Transporters [BR:
cmao02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118798907 (tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
Rad17
AAA_22
Motif
Other DBs
NCBI-GeneID:
118798907
NCBI-ProteinID:
XP_036414420
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MKAAMASYLSFFLLLCVDVCVVKTLGVGQLSSLLVPEAFITLWAVGLLRVCLLLLTVFSY
PGSPVWLKSFEGVQTVTVHGLLYPAYITFLWACGWSTVELLWGWHTWEALLQGYAVLALS
LLLWKRYVPSILSKAKVKAPEKGQTSLQRLLGYLKPYRNRFTAVISLVILSSLGEMAIPH
YTGKMTDWIMKEDEPEAFSNAIKVMSVMTIMSAVLEFVCDLIYNITMSLIHTSIQSQVFQ
CVLKQEIAFFDKISTGEIVSRITTDTNTMSESLSEELSLLMWYSFRMLFLLSSMLYLSAR
LTIFTILGLPVIWIIPEFTGRFYQTHSVKVQESLAKANNVAMETFSSMKTVRSFANEDGE
TERYRKCLEDTYSLNKVEAAAYAASTWTNSMSTLALKVCILYYGGQLVAGNDVSSGDLVS
FVLYELQFTSAMEALMSYYPRVKKAIGASQKIFEYVDRKPDIPPEGSLAPEKLQGHVRFN
NITFAYPTRPEQNVLKGVSLELKPGKITVLVGPADGGKSTIVRLLERFYQPQSGEILLDG
EPLLSYKDQYLHEKISVVSQEPVLFARSIKENIKYGRVAASNEDMQKAAKLASAHEFISS
FPEGYDTDAGEKGGKVSGGQKQRIAIARALIRQPQILVLDDATSDLDDHNVHLVHQAVLN
SNSDRTVLLITHRMSGVELAHNVVFLRAGEVLEQGSHAELLKRNGPYAEFVQQQRTSFYR
KTDETTDSNSSS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgcgatggcgtcgtatctgtcctttttcttgttgctgtgtgtggacgtgtgt
gtggtgaagacgctcggtgtggggcagctctcctcgctgctggtcccggaggcgtttatc
acactctgggctgtggggctgctgagggtctgcttgcttctcctcacagtcttctcttac
cctggaagcccagtctggctcaaaagctttgagggagtccagactgtaactgttcacggt
ttattgtatcctgcctacattacgtttctctgggcgtgtggctggtcaacggtggagctt
ctgtggggatggcacacctgggaagcgctgctgcagggctatgctgtcctggctctgtct
cttctgctgtggaaacgctacgtcccatccattttgtcaaaggctaaggtgaaagccccc
gagaaaggccagacatccctgcagaggctgcttggatacctaaagccgtaccgcaaccgc
ttcactgcggtcatctccttggtgatcctgtcctccctcggagagatggcgatccctcat
tacacaggtaaaatgactgactggatcatgaaagaggacgaacctgaggctttcagtaac
gccatcaaggtcatgtctgtcatgacaatcatgagtgctgtgcttgagtttgtgtgtgac
ctcatctataacatcaccatgagcctcatccacacctccatccagagtcaggtcttccag
tgcgtgctcaaacaggaaatcgccttctttgataagatttcaacaggtgagattgtgtct
cggatcaccacggacaccaacaccatgagcgaaagcctgagtgaggaactgagtctgctg
atgtggtactccttccgcatgctcttcctgctaagctccatgctgtatctctctgcccgg
ctgaccatcttcaccatcctcggccttcctgttatttggatcatcccagagtttactgga
aggttctaccagacacattctgtaaaagtgcaagaatctctggccaaggcgaataatgtt
gccatggagacgttttcgtccatgaagactgtgaggagcttcgccaacgaggatggagag
acggagaggtacaggaagtgcctggaggacacctactcactcaacaaagttgaagctgct
gcttacgctgcctcgacctggaccaacagcatgtctactctggctttgaaagtctgcatc
ctgtactatggggggcagctggtggcaggaaatgatgtcagcagcggcgatctggtgtct
ttcgttctttacgaacttcagttcacttctgccatggaggctctgatgtcatactaccct
cgcgtgaagaaggctattggagcctcacagaagattttcgagtatgtggaccggaagccg
gatattcctcctgaaggatctttagctcctgagaaacttcagggtcatgttcgcttcaac
aacatcaccttcgcctatcccacaaggcctgaacagaatgttctcaagggtgtttctttg
gagctgaagccagggaagatcactgtccttgtaggtccagcagatggaggcaagagtact
atcgtccgtctgctggagaggttttaccagccccagagtggtgagatcttactggacgga
gagccactgctgagctacaaggaccagtacctgcatgagaagattagcgtggtgtcccag
gaaccagtgctgttcgcccgctccatcaaggagaacatcaaatatggcagagtggccgcc
tccaatgaagacatgcagaaagctgccaaactggccagtgcacacgaattcatcagcagc
tttccagaaggctatgacaccgatgctggagaaaagggaggcaaagtgtctggaggtcag
aaacagcggatagccatagcaagagctttgattcgacagccgcagatcctcgtgctggac
gatgccaccagtgacctggatgaccacaatgtacatttggttcaccaggctgtgctgaac
tcaaactcggaccgcacggttctcctcatcacccaccggatgagcggagtggagctggct
cataatgtggtcttcctgcgggctggcgaggtgttggagcagggcagccatgctgagctt
ctgaagaggaacggaccctatgccgaattcgtacagcagcagagaaccagcttctatcgc
aaaacggatgaaacaacggacagcaactcgtcttcctga
DBGET
integrated database retrieval system
