KEGG   Colossoma macropomum (tambaqui): 118800617
Entry
118800617         CDS       T09004                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04145  Phagosome
cmao04514  Cell adhesion molecules
cmao04672  Intestinal immune network for IgA production
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118800617
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118800617
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118800617
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118800617
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmao04147]
    118800617
Exosome [BR:cmao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118800617
  Exosomal proteins of epithelial cells
   118800617
  Exosomal proteins of breast milk
   118800617
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 Psg1
Other DBs
NCBI-GeneID: 118800617
NCBI-ProteinID: XP_036416776
LinkDB
Position
Unknown
AA seq 265 aa
MNWNSLSETLSVVTECRDTMIRILQLLLTLTLSIRTDGYYTYTTDECITSSPDLSDAEFI
RTTYFNKDPVARFNSTVGEYVGFTALGVKNAERFNKGPEVAQMRAELERYCKPNLQIDYS
NVLEKTVKPRVKLVSEKPGNGGHPAMLMCSAYGFYPPAIDVYWLKDGKKVTHAVTSTAEM
ADGDWYYQIHSHLEYTPTSGEKISCVVDHASSKEPIIYNWDGSLPESEKNKIAIGASGLV
LGIILSAAGFIYYKKKSSGRILVPS
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaactggaactcactctctgaaactctctcagttgttactgaatgtagagacacaatg
atccggattctgcagctgctgctcacactgactctgtctataaggacagatgggtattat
acgtacacgacagatgaatgtatcaccagttcaccagatctgtcggatgcggaattcatc
aggaccacgtattttaataaggatccagtggcacggtttaacagcactgtgggggagtat
gtagggttcactgcgctcggagtgaagaatgcagagcgctttaacaagggacctgaagta
gcgcagatgagagctgagctggagagatactgcaaacccaatctacaaatagactactct
aatgttctggagaaaacagtgaagccaagggtcaaacttgtgtcagaaaagccgggcaat
ggtggtcatccagccatgctgatgtgcagcgcgtatggcttctaccccccagccatcgat
gtgtactggctgaaagacggtaaaaaggtgacccatgctgtgacctccactgcagagatg
gctgatggagactggtactaccagatccactcccacctggagtacacgcccacatctgga
gagaagatctcctgtgtggtggaccacgccagctccaaggagcccatcatctacaactgg
gatggctctcttcctgagtctgagaagaacaagattgctattggagcttcagggctggtg
ttggggatcatcctgtcagctgctggattcatctactacaagaagaaatcctcagggcgg
atcctggtgccgagttaa

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