Colossoma macropomum (tambaqui): 118802026
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Entry
118802026 CDS
T09004
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118802026 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118802026 (trpc5a)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118802026 (trpc5a)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118802026 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
118802026
NCBI-ProteinID:
XP_036418368
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MNPMSHLYYKKSSYSPYRDRIPLHIVRAEVELSQEERSFLSAVEKGDYAGVKHALQEAEV
YYNIDVNCVDPLGRSALLIAIENENLEVMELLLDHGVNTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQHKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDDQSEELDPRECRDLAKLKLAMKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCIIIGLLFPVYSIVYLLAPKSSLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLM
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETQAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIVPSPKSAWYLCLWLHRWLCRRGDTPHDEKHENLKDLTEKHADRIIQNKHYQEVI
RNLVKRYVAAMIRSAKTNEGLTEENFKELKQDISSFRYEVMDLLGNRKPPRRTYSSSSEA
TLRDEACDDGDAPNNRCRGDSDSSRGKAFKAASSAGSPYGVSALFHSLSAMEFPTSATAI
STYNREDRPKINGLRKNPSPCSSTSSVTAAGPAVSRTWSRFTRFSGSKKNSFRRLGLLFS
RMGSHLPQPAGVSSATYTISDGLLHPPGAWSDLGISRGDGPVTRNESNLNHADTPTTTTD
CGSAPRITNRQRTNGRDILLTLGPLAAPPSLHCASSFSASSSHLLDSNEDVFQGLVGPCD
GHTPDPAHREVEQDDSVTTQL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctatgtcccatctctattacaaaaaatccagttactctccatatcgggaccgg
atccctctgcacatcgtccgggcggaggtggagctctctcaggaggaacggtcattcctg
tcggctgtagagaagggagactatgccggggtcaagcatgcgctacaggaagcagaggta
tattacaacatagatgtaaactgtgtggatccactgggccgcagtgccctgcttattgcc
atagaaaatgagaacctggaggtgatggagctgctgttggaccacggagtgaacactgga
gacgctctgctctatgccattcgcaaagaagtggtgggagcggtggagttgctgttatct
cacagaagaccaagcggagaaaaacaggtaccctctttaatgatggatgcccagttttca
gagttcacgcctgacatcactcccatcatgcttgctgcccacactaacaattatgagatc
attaagctgttggtccagcacaaagtcaccattcccagaccacaccagatccgctgtgac
tgtgtggagtgtgtgtccagctctgaggtggacagcctgcgtcactcccgttcccgcctc
aacatctacaaagccttggccagtccgtcactcattgccctctccagtgaggaccccatc
ctcactgcttttagactgggctgggaattgaaggagctcagcaaagtggagaatgaattc
cgtcaagagtatgaggagctttcacaacagtgtaaacgctttgccaaagatcttctggac
caggcgcgaagctcccgtgaactggaaaccatcctcaaccaccgtgatgaccagagcgag
gaactggatccgcgagagtgccgagacctggccaagcttaaattggccatgaagtatcac
cagaaggagtttgtggctcagccaaactgtcagcagctgttggcaacactctggtacgat
ggctttccaggatggcgccgtcggcactgggccgtcaaactggtcatgtgcatcatcatc
ggccttctcttccctgtctattcaattgtctacctgctggctcccaaaagctcattgggc
ctcttcattaagaagcccttcatcaaattcatttgccatactgcctcttacctcaccttc
ctcttcctcctactcctcgcctcccagcacatcgcacgcaccaacctccacatgcaaggt
ccaccgcctactgtagtggagtggatgatactgccctgggtgctagggtttatctgggct
gaaattaaggagatgtgggatggaggtttcaccgagtatgtacatgactggtggaatcta
atggacttcgctatgaactctctttacttagctaccatctctctaaagattgtcgcgtat
gtcaagtataacagttctcgtccacgtgaggaatgggaaatgtggcatccgacactgatg
gcagaggccttatttgccatcgcgaacatcttcagctccctgcggctcatctctctcttc
accgccaactctcacctgggcccactgcagatatctttgggtcgcatgctgctggacatc
ctcaagttcctcttcatttactgcctggtgctgctggccttcgccaacggcctcaaccag
ctctacttctactacgagacgcaggctgcggatgagcctaaccattgcaaggggatccgc
tgtgagaaacagaacaacgccttctccacgttatttgagactcttcagtctctgttttgg
tccatatttggcctgctgaatctttatgtcaccaatgtgaaggcgaggcatgagttcaca
gagtttgttggagccaccatgtttggcacctacaacgttatttcactggtagtgctcctc
aacatgcttattgccatgatgaacaactcataccagcttattgccgaccatgcagacatt
gaatggaagtttgccaggactaagctctggatgagttattttgatgagggtggcacactt
ccaccgcctttcaacatcgtccccagcccaaagtcagcctggtacctctgcctctggctg
cacagatggctatgcaggagaggcgacactccacatgatgagaaacatgagaatctcaag
gacttaacagaaaagcatgctgacaggattattcagaataaacactatcaggaggtgatt
cgtaatctagtgaagaggtatgtagcagctatgatccgcagtgcaaagacaaatgagggc
ttgacggaggagaactttaaggagctgaagcaggacatctctagttttcggtatgaagtc
atggaccttcttgggaaccgaaagccaccacgacgtacttactcttcaagtagtgaggct
acacttcgcgatgaggcctgcgatgatggcgatgccccaaataaccgctgccgtggtgac
agtgatagcagcagaggcaaagcttttaaagcagcttcatctgcaggctccccatatgga
gtctctgctctctttcactccctttctgcaatggagtttcccacatcagcgacagcaata
agtacatacaacagggaggacagaccaaagatcaatgggctgaggaaaaacccctcaccc
tgctcttccacttcctcagtgactgcggctgggcctgcagtctcgagaacgtggagcagg
tttacacgcttttctggttctaagaagaactccttcagacgtctggggctgttgttctcc
cgcatgggcagtcaccttccccagcctgctggtgttagttctgccacatacactatctca
gatggactgctccacccaccaggagcctggagtgacctgggcatctctcgtggcgatggt
ccggtcacccgcaacgagagcaacctcaatcatgcagatacacccaccaccaccaccgac
tgtggcagcgctcctaggataacaaacagacagagaaccaacgggagagacattctgttg
actttagggcccctggctgcgcccccttccctgcactgtgcttccagtttctctgcctcc
agttctcacctcctggactcgaatgaggatgtgtttcagggattagtcgggccttgtgat
ggacacacgccagacccagcccaccgtgaggtggagcaagatgactcagtgaccacacag
ctatag
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integrated database retrieval system
