KEGG   Colossoma macropomum (tambaqui): 118802920
Entry
118802920         CDS       T09004                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04145  Phagosome
cmao04514  Cell adhesion molecules
cmao04672  Intestinal immune network for IgA production
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118802920
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118802920
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118802920
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118802920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmao04147]
    118802920
Exosome [BR:cmao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118802920
  Exosomal proteins of epithelial cells
   118802920
  Exosomal proteins of breast milk
   118802920
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 I-set C2-set_2 ig C2-set_3
Other DBs
NCBI-GeneID: 118802920
NCBI-ProteinID: XP_036419242
LinkDB
Position
Unknown
AA seq 248 aa
MYEFVSSTLIKMKLCLILVCAALQYTEAKIQHTDIAVDLCSDTDEDKEKIFGLDGEEMWH
ADFSQGKGVMTLPEFADPFSYEEGAYEGAVTNQEICKKNLGIAAKSYNYPAEPKDAPQSS
VYSKHKVQLGSKNTLICHITGFYPPHARVSWTKSNVKVTNGVSFSRYYPTSDGTFNLVST
LSFTPEEGDIYTCTVEHTALDRPLTKTWDVQVALPSVGPSVFCGVGLAAGLLGVAAGTFF
LVKGNNCN
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtatgagtttgtttcctctacgctgatcaagatgaagctgtgtttgattctcgtctgt
gcagctcttcaatacacagaggctaaaattcagcacacggacattgcagtagatctgtgc
tctgatacagatgaagataaagagaaaatatttgggctggatggagaagaaatgtggcac
gctgacttcagtcaggggaaaggagtgatgaccctgccagagtttgcagatcctttctcc
tatgaagaaggagcctatgagggggctgttactaatcaggaaatttgcaaaaaaaactta
ggcattgctgcaaaaagttacaattaccctgcagaaccaaaggatgccccccaaagctca
gtctactccaagcacaaagtacagctgggctctaaaaacaccctcatctgtcacatcact
ggattctaccctcctcatgccagagtgtcgtggactaagagcaatgtaaaagtaacaaat
ggagttagttttagcagatattatccaaccagtgatggaaccttcaacctggtctccacc
ttgagcttcactccagaggagggtgacatctacacttgcactgtggagcacacagccctg
gacagaccactgaccaaaacatgggatgtgcaggtggctctgcccagtgtgggtccgtct
gtgttctgtggagtgggtctggctgcaggactgctgggagtcgctgctggaactttcttc
ctcgtcaaaggaaacaactgtaactga

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