Colossoma macropomum (tambaqui): 118803657
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Entry
118803657 CDS
T09004
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118803657 (scn4ab)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118803657 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
118803657
NCBI-ProteinID:
XP_036420004
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MPRGKITLLEVWRRNRAARLKKSKDLKLWPHQLAQLRDPEVVASLAQQNAKMARLLPHTD
TDAFRRFTPESLVEIERRMAEEAAEQERRKALNIEIPEEDLPKPSIDLEAGKALPFIYGD
PPPELLNIPLEELDPYYKAKKTFIVISKGNTINRFNAEPACYILTPFSPIRRGAIRILIH
SLFSMFIMVTILSNCVFMTMSNPPEWSKIMEYVFTGIYTFEALVKVLSRGFCIGDFTFLR
DPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKL
GDVMILTVFCLSVFALIGLQLFMGNLRHKCVKDPFRGLETSFNTTDNTTYTNSTFDWEEY
LNNQENYYFLPDSTDALLCGNSSDAGLCPFGYMCMKAGRNPNYGYTSYDNFGWAFLALFR
LMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNEATIAEA
KEKEEEYARIMEQLRKQAEAKKKGMVKGSRSSLSSQKKGDDFADDGGGRVKTEHDNIALK
PLSDKESLEVLKSNGSKGSMDHLEVTSAHKRKPSVVSNESNALEEFEELERPCPPCWYKF
ADIFLKWDCCTPWIRFKKWVYFIVMDPFVDLGITICIILNTVFMAMEHYPMTHEFESVLS
VGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSF
RLHRGENEEFELQSADVLIGHEEFGESKPIGGLHTFVLMRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHMTDFFHSFLIVF
RILCGEWIETMWDCMEVAGQGLCIVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLASDDD
GEMNNLQIAIGRITRGIDWVKATVIRQVRRLLGLKPIEEQKKENDEDDFKTGNDLVLNHM
DSEDVAQMKKLGGTFETAVVLAVKVPIAKGESDFESPNEDDTSEDEDKKADEKTKLKVAG
ADDSSNCSTVDKPPEVQEAESEDEQDPTSPEDCYTEKCIRRCPCLDVDITQGRGKSWWNL
RKTCYAIVEHNYFETFIIFMILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVVEM
LLKWVAYGFKTYFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRAL
SRFEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKFYYCLNTTSEEVFLL
EKVNNKSDCLELISAGLDARWMNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSRDV
EDQPSYEANLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGQDLFMTEEQKKY
YNAMKKLGSKKPQKPIPRPQNCFQGFIFDIVTKQFFDILIMALICLNMITMMVETDEQSE
EMENILFYINFVFIVIFTGECVLKVIALRQYYFSVGWNIFDFIVVILSILGIMLADLIEK
YFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIF
GMSNFAYVKKEMGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSGPPDCDPEIEN
PGTDVRGNCGNPAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESGEPLCEDDFEM
FYETWEKFDPDASQFIDYSSLSEFCDTLKDPLRIPKPNTIKLITMDLPMVPGDKIHCLDI
LLALTTEVLGESEEMDTLKASMEEKFMANNPSKVSYEPITTTLRRKQEEVAAVVIQRAYR
KHMLKRTLKHASYMFREKSNLKRKDEEAPEKVGMIASRMSQLYGDQASKQLSSVTVAFPE
KKDNVGRGEGKCPSVEVQNEVVLHSAPFTVPESTAYVDNLRESIV
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaggaaagatcaccctactggaggtgtggcgcaggaatcgtgcagcacgcttg
aagaaatccaaagatctgaaactatggccacatcaactggcacagctgagagaccccgag
gtggtggcatccctcgcccagcagaatgccaagatggccagactgctcccccacacagac
accgatgcgttccgccgcttcacgccggagtcactggtggaaatcgagcggcgcatggca
gaggaagctgccgagcaggaacgtaggaaggccttgaatatcgagatccccgaggaggac
ctgccaaaaccctccattgacctggaggctggcaaggctctgccattcatctatggagac
cccccaccagagctcctcaacatacctctggaggagttggatccctattacaaagcaaag
aaaactttcatcgtgatcagcaaagggaatacaatcaatagattcaacgctgagcctgcc
tgttacattctaactccatttagtcctatccgcagaggagccatcagaatactcatacat
tcattgttcagcatgttcatcatggtaacaatcctgtccaactgtgtgtttatgacgatg
agtaaccctccagaatggagcaaaattatggagtacgtttttacaggtatctacactttt
gaggctctagttaaagtcttgtccagagggttctgtattggagatttcacattccttcga
gatccatggaactggctagatttcatggtgatcagcatggcgtacattacagagtttgtt
gatctgggaaacgtgtcagctttgaggaccttccgtgttctccgagccctgaaaacaatt
actgtgattcctggtctgaaaaccattgtcggtgcacttatccagtctgtgaagaagctg
ggagatgtcatgatcctgaccgtcttctgtctcagtgtctttgccctcattggcctgcag
ctgttcatgggaaatctgcgccacaaatgtgtcaaggatccttttcgaggccttgaaaca
agcttcaacacaacggacaacacaacgtatacaaatagcacttttgactgggaggaatac
ctcaataatcaagagaactactactttctcccagatagtacagatgcacttctctgtgga
aacagctctgatgctgggctgtgtcctttcggatacatgtgtatgaaagccgggagaaat
ccaaattacggctacaccagctatgacaactttggctgggccttcctcgccctcttccgc
ctcatgacgcaagacttctgggaaaacttgttccagctgactctccgggcagcagggaag
acctacatgatcttctttgtagtcgtcatctttttgggctctttctacctgatcaacctc
attttggctgtggtggccatggcatacgcagagcagaacgaagccaccatagcagaagct
aaagagaaggaagaggagtacgcaagaattatggaacagctgaggaagcaagctgaggca
aaaaaaaaagggatggttaaaggcagcaggagctcactctcaagccaaaagaaaggtgat
gattttgctgatgacgggggaggcagagtaaagacagaacacgacaacattgccctaaaa
cccctctcagacaaagagtctctcgaggtattaaagtcaaatggatccaaaggaagcatg
gatcacctagaagtgaccagcgcacacaaaaggaaacccagtgtagtgagcaatgaaagc
aatgcattggaagaatttgaagagttagaaagaccgtgcccaccctgctggtacaagttt
gctgacattttcctgaagtgggactgctgcacaccatggatcagattcaaaaagtgggtg
tacttcattgtgatggaccctttcgtggacctgggcatcactatctgcatcatactgaac
actgtgttcatggccatggaacactacccaatgacacatgagtttgaatcagtcctgtct
gttggaaacttggtattcacaggtatcttcacggctgagatggtcctcaaactcatcgcg
atggacccttactactactttcaggttggctggaacatattcgacagtatcatagtgaca
atgagcctagtggagctgggcttggccaatgtgcaaggactctctgtgctcaggtccttc
cgtcttcacagaggagagaatgaagaatttgagctacagtcagcggacgttttaattgga
cacgaggaatttggggagagcaagcctattggaggacttcacacctttgttttgatgcgt
gtcttcaagttggcaaagtcctggcccacgctgaacatgctgattaaaatcattggtaac
tctgtgggcgctctcggcaacctgaccctcgtcttggccatcattgtcttcatcttcgcc
gtggtggggatgcagctgtttggaaagagctacaaggattgtgtgtgcaagattgcagca
gattgtgagcttccacgctggcacatgacagactttttccattccttcctcattgtgttc
cggatcctgtgtggggaatggatcgagaccatgtgggactgcatggaggtggcgggtcag
ggcttgtgcattgtagtcttcatgatggtcatggtgatcggaaacctggtggtcctgaat
ctctttctggcattgctgcttagctcgttcagtggagataatctggcatcagacgatgac
ggtgaaatgaacaacctgcagattgccattggaaggatcaccagaggcattgactgggtc
aaggccaccgttattagacaggtcaggcgtctgctgggcctcaagcccatagaagagcag
aaaaaagagaacgatgaagatgacttcaaaactggcaacgatttagtcttgaaccacatg
gactctgaggatgtagcacagatgaaaaagttgggtggcacttttgaaacggctgttgtg
cttgcagtcaaagttccaattgcaaagggagaatctgattttgaaagccccaatgaagat
gacacttctgaggatgaagacaagaaagctgatgaaaaaaccaaactgaaagtagcagga
gcagatgactcgtccaactgcagtaccgtggataagccacctgaggtacaagaggcagag
tcagaggatgaacaagatccaaccagcccagaggactgctacactgagaaatgcatcagg
cggtgtccatgcctggatgtggatatcacccagggcagaggaaagtcatggtggaacctt
cgaaagacctgctatgctattgtggagcacaactattttgagactttcatcatcttcatg
attctgctcagcagcggtgccttggcttttgaggacatttacattgagcagcgaagagtg
attaaaatcatccttgagtatgcagatcaagtcttcacctatgtttttgtcgttgagatg
ctcctaaaatgggttgcctatggtttcaagacttacttcacaaatgcttggtgctggcta
gacttcctcattgttgatgtctccctaatcagtttgaccgctaacattttgggttactct
gagcttggacccatcaaatccctgcggacattgagagctctcaggccacttcgtgctcta
tctagatttgaaggaatgagggtggtggtgaatgccctggttggagccatcccctccata
ttcaacgtaatgctggtgtgcctgatcttctggctgatcttcagcataatgggggtgaac
ctgtttgcaggaaagttctactattgcttaaacacaacctcagaggaggtattccttctt
gagaaggtgaacaacaaaagtgactgcttagaacttattagtgctggtttagacgcacga
tggatgaacctcaaggttaactatgacaacgtgggcatgggctacctctccctactgcaa
gtggcaacatttaaaggatggatggatatcatgtatgctgctgtggattctcgtgatgtg
gaagatcaaccctcttatgaggcaaacctttacatgtacctttactttgttattttcatc
atctttggatccttcttcaccctcaatttatttattggtgtcatcattgataatttcaac
caacaaaaagcaaagttaggagggcaagatctctttatgacagaggaacagaagaagtac
tacaatgccatgaagaagcttggctctaagaaaccacagaaacctatcccgcgaccccag
aactgtttccaaggattcatctttgacatcgtaacaaagcagttctttgacatcttgatt
atggcgttgatctgtttgaacatgatcaccatgatggtggagactgatgaacagagtgaa
gagatggaaaacattctcttctatatcaattttgtcttcattgtcatcttcactggagag
tgtgtacttaaagtcatcgcccttcgacaatactacttttctgttggatggaatattttt
gattttattgttgtcattctttcaattttgggcatcatgctggcagatctcattgagaaa
tacttcgtgtctcccacccttttccgtgtcatccgacttgccagaataggccgtgttctg
cgtctgatcagaggagctaaaggcatccggacgctgctgtttgcattgatgatgtccctc
cctgctctcttcaacatcggcctcctcctctttttgatcatgttcatattctccatattt
ggcatgtcaaactttgcctatgtgaaaaaagagatgggcattgatgacatgttcaatttc
gagacctttgggaacagcataatatgtttgttcatgatcacaacatctgcaggatgggat
ggtctcttgtcccctattctcaatagcggacctcccgactgtgacccagagattgagaat
cctggcacagacgtgagaggtaactgcgggaaccctgcggtggggatagtctttttctgc
agctatatcgtgatgtccttccttgtggtggtcaacatgtacattgccatcattctggag
aactttaatgtagcaacagaggagagtggtgagcccttgtgtgaggatgattttgagatg
ttctatgagacctgggaaaagtttgatccagatgcttcacagttcattgattacagttcg
ctctcagaattctgtgacacactgaaggacccactgaggatcccgaagccaaacacgatc
aagctgatcaccatggacctccccatggtacctggggacaagatccattgtcttgacatc
ctgctagctctcacaactgaagtgcttggcgagtctgaggaaatggacacactcaaagca
agcatggaggagaaattcatggcaaataacccctcaaaagtgtcatatgagccaataacc
accactcttcggcgcaagcaggaggaggtggctgctgtagtcatccaaagagcctaccgc
aaacacatgctaaagcgtactctcaaacatgcatcttacatgttcagagaaaagagcaac
ttgaagaggaaggacgaggaggcgccagagaaggtgggaatgattgcaagccgaatgagc
cagctctacggggaccaagcttcaaagcagctttcttctgtgaccgtcgctttccccgaa
aaaaaggacaatgtaggaagaggcgagggcaaatgtccttctgttgaggtgcagaatgag
gtggtcttgcattctgccccattcactgtccctgagtcaacagcctatgtggacaacttg
agagagtccattgtgtaa
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integrated database retrieval system
