Colossoma macropomum (tambaqui): 118806740
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Entry
118806740 CDS
T09004
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118806740 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118806740 (tdg.2)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
118806740 (tdg.2)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118806740 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
118806740
NCBI-ProteinID:
XP_036424165
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MEEKQYEYQTAPMDYFQHWYHSTPEQFQPQPVPQYSQMVNAFQHQQELGEDRIMSELAVY
KDQYPVQTSQPHQLPVPPTALPSTPSKGKKRGRPPKQKPEEGEEQADTKDTVKKAKRTLD
RFNGMSVEEVMARKLPDIITYNLDILIIGINPGLMSAYKGRHYPNPGNHFWKCLFLSGLT
DEQLNYMHDQTLPEKYGIGFTNMVERTTPGSKDLSNKEIREGGKQLLEKLQKYRPRIAAF
NGKGIYEIFCNEIFGVKAKNLEFGLQPYKVPDTETVCYLMPSSSPRCAQFPRAQDKVHFY
IKLKELRNQLKGFVKNQEVQETQYTFDLAMAKEDAKRMVIKEEQHDPGYEESCTSGTQQA
CSFYPNERGAANSEYSRVMDHIRSNQWTVQPFEDQIPDIRCPSDNRIS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtatgaatatcagacggcccccatggattattttcagcattggtac
cattccactccagaacagtttcagccacagccggttcctcagtacagccagatggtaaac
gcttttcaacaccagcaggaactcggagaggacagaatcatgagtgaattagctgtgtat
aaagatcagtatccagtacaaaccagtcaaccccaccagctgcctgttccgcctacagct
cttccatcaacacctagcaaagggaagaagcgagggagaccaccaaaacagaagccagaa
gagggagaagagcaggcagataccaaagacactgtgaaaaaagccaaaagaaccctggac
agatttaatggcatgtctgtggaagaggtcatggccagaaagctgccggatatcatcacc
tacaatctcgacattcttataattgggatcaatcctggactgatgtcagcatacaaagga
cgccattacccgaatcccgggaaccatttttggaaatgcctgttcttatcaggactcaca
gatgagcagttaaactatatgcatgatcagactcttccagaaaagtatggcatcggcttc
actaatatggtagagaggactacacctgggagtaaagacctctcgaataaagagattcgg
gaaggaggtaaacaacttctggaaaagctgcagaaatacaggccacgaatagcagcattt
aatgggaaaggtatttatgaaatattctgtaatgaaatttttggagtgaaagccaagaac
ctagaatttggactacagccctacaaggttccagacacagaaacagtttgttatcttatg
ccatcctccagtccccgctgtgctcagttccctcgtgctcaagacaaagttcatttctac
attaagctgaaggagcttaggaaccagctcaagggtttcgtgaagaaccaggaggttcag
gagacccagtacacatttgacttggccatggctaaagaggatgccaaaaggatggtcatc
aaagaagagcagcatgatcctggctatgaggaaagctgtacaagtggaactcaacaggcc
tgtagtttctatcctaatgagagaggtgctgcaaattcagaatactcccgagttatggat
cacattaggtcaaaccagtggacggtacagccgtttgaagaccagattccggacattaga
tgccccagcgataataggatatcttga
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