Colossoma macropomum (tambaqui): 118807046
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Entry
118807046 CDS
T09004
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118807046 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118807046 (kdm2ab)
04121 Ubiquitin system [BR:
cmao04121
]
118807046 (kdm2ab)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118807046 (kdm2ab)
Enzymes [BR:
cmao01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
118807046 (kdm2ab)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118807046 (kdm2ab)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118807046 (kdm2ab)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118807046 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118807046 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
Cupin_8
DUF7885
F-box
LRR_At1g61320_AtMIF1
PHD
LRR_4
LRR_Zer-1
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
118807046
NCBI-ProteinID:
XP_036424721
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MEENQPRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLEEKLQSNFFNSDLVRIMDGKDF
TFEYIQREGLRDPIIFTKTDGLGIQMPDEDFSVSDVKLFVGSRRMIDVMDVNTQKGIEMS
MSQWRRYYETPPSEREKLYNVISLEFSHTKLEHLVKRPASVDMIDWVDNMWPRHLKERQR
DSTNAIIDMQYPKVQKYCLMSVKGCFTDFHIDFGGTSVWYHILRGAKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATACQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPSKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LKKEDYIKPNKLDDHTKDGQKEEEGEEEEEEEDDSNKDIKEENDEEEAPSLPAHPGVKVH
LTPFELEGLWQLLHKLEELPAHKKCVPTGIRNAPALLSDIRAVLEEHASDDPKLSYTGNP
IVTWPKRPSWYRPPAPPPSLLYRSRAPGSGPMLAPVPRPMKPPSSISALRRRRVRCKRCV
ACLRTECGDCTYCKDMRKFGGPGRLKKTCILRQCLAPGLPLSAVCAICKEGNQEAEGSEA
TQSLMECSECAQITHPECIKVPGEGVINKDLPSCWECPKCVQEKNRESSSSSSEKEGESS
VTTGSPSSGPPAKRAYREGIGVGGLRWGLRKGRPPLSPSSLPLTRSRRQPPPSQRLLLQH
QQSRKRASALELQHRKRIKLERNKILQSPRSPVSLSPKLLRQRSLERAGLIRAALNRATS
RGRGLPACRGRGVRLRGGGRGGTLRGRTEGEEGEADSNEEEGQEKEERRENGWGGKENRP
QRHGARANEEENGDGPQNGERKRERDEAAEHTQSDSSVVLGDDARGQRSCVTVTLRPSKG
RRDPSTIVPKLEANVSPRSLPQSPRDLYGKSLLRPPLRNGVRRSDKGHLHTECSRTQAVR
SHTDRTHLQTSTLTRSTSKHTHMGRNLRCNSGESHQNGKKSRVDRAKPPASSSLSSPMSR
RSPEQNGASEPGWERLVWVSVFRYLTRTELCVCMAVCKNWYKWGCDKRLWTRISLSRCQS
ISPQALSGIIKRQPVTLDLSWANISKKQLTWLVNRLPGLKDLVLSGCSWVSISALSSPSC
PLLRSLDLRWADGVKDAQIRELLSPPGSNNRSQLRNMQCLRLCGLDVTEATLRLIIRHMP
QLTRLELSHCPLTDNALNLLTAVGSSTRNTLTHLNLAGCSRLTDHCLPYLQRLSCLSVLD
LRGCKGVSRQACENFISELSVNALYCLSDDKLIQRIS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaccaaccccgttacagcaagcgcctgcgaacaggaacgcgacggcgttac
caggacgatggcatctcagatgatgagattgagggcaagaggacttttgacctagaagaa
aaacttcaaagcaacttctttaattcagacttggtcagaatcatggatggaaaagacttc
actttcgagtacatccagcgggagggacttcgggaccccatcatctttactaaaacagat
ggtcttggcattcagatgccggatgaggatttcagtgtgagcgatgtgaaactgtttgtg
ggcagtcgaagaatgattgatgtgatggatgtaaacactcaaaagggtattgagatgtca
atgagtcagtggagacggtactatgaaactccaccttcagaaagggaaaagctgtacaat
gtcatcagtctcgagtttagtcatacgaaactagaacatctcgtcaagaggcctgcctcg
gttgatatgatcgactgggtagacaacatgtggccacggcacctgaaggagagacagaga
gactccactaatgccatcatagacatgcagtaccccaaagtgcagaagtattgtctgatg
agtgtaaagggctgcttcactgacttccacatagactttggcggcacatcagtctggtac
catatcctgaggggagccaaggtgttctggctgattccgcccacgccgcagaacctggag
ctctatgaaaactgggttttgtcagggaaacagggtgacatctttcttggagacaaagcc
actgcctgccagcgcattgagctaaagcagggctacaccttcatgatcccctcaggctgg
atccatgcagtatacactcctgaagatactctggtgtttggtgggaatttcctacacagt
tttaacattccaatgcagctgaacatctacaacattgaggaccgcacacgggtcccatct
aagtttcgttacccgttctattacgagatgtgttggtatgtgttggagcgttacctctac
tgtctgaccaacacctctcatctaacgccagagttccagaagcactctctgggtataggg
ctgaagaaagaagattacatcaaaccaaacaaactcgatgaccatacaaaagacggacag
aaggaggaggaaggggaggaggaggaggaagaggaggacgatagcaacaaggacattaaa
gaggaaaatgacgaagaagaagccccctcccttccggcccatccgggtgtgaaagtgcac
ctaacaccatttgagctggagggcctgtggcagctactgcacaaactggaggagctgcca
gctcacaagaagtgtgtccccacaggcatcagaaacgctccagcgcttctcagtgacatc
cgggctgtgctagaggagcatgccagtgatgatcccaagttgtcttacactggaaatccc
attgtcacatggcccaaaaggccctcatggtataggccacctgctcctcccccatctctg
ctttatcgctcgcgggctccaggctcaggccccatgttggctccggtgccacggcccatg
aaaccaccttcctctatctcagctcttcggcgacggcgcgtgcggtgcaaacgctgtgtg
gcctgcctgcgcaccgagtgcggggactgcacttactgcaaggacatgaggaaatttggt
ggccctggcagacttaagaagacctgcattctcagacagtgtctggctccgggactgcct
ctgtcggctgtgtgtgccatatgtaaggagggaaaccaggaggctgaaggctcggaggcc
acacagtctctcatggaatgctctgaatgtgctcagatcactcatccagaatgcataaag
gtgccaggggagggtgtgatcaataaggacctgcccagttgctgggagtgtcccaaatgt
gtccaggaaaagaaccgagagtcttccagcagtagttctgaaaaagaaggtgaaagcagc
gtgaccaccggctctccgtcctcaggccctccagccaagcgagcgtacagagagggcatc
ggagtgggggggctgcgttggggtcttcgcaagggtcggccgccactctcaccctcttcc
ttgcctctgacccgctccagacgccaacccccaccctcacagagactcctactgcagcac
caacagagccgcaagagagccagtgcactggagctacagcacagaaagaggataaaacta
gaacggaacaaaatcctccagtcgccacgttcgcctgtttctctttctccaaagctcctg
cggcagcggagtttggagagagccgggctgatccgggcagcgctaaacagggccacgtcc
cgcgggagagggctgccagcctgccgggggagaggggtgcggctcagaggcggaggaaga
ggcggcaccctgagaggacggactgagggagaggaaggtgaagcggacagcaatgaggag
gaagggcaagagaaggaagagaggagagagaacgggtgggggggcaaagagaaccggcca
cagagacacggggcacgggcgaacgaagaggaaaatggagatggaccacagaacggagaa
cgaaaaagggagagggacgaagctgcagagcacacgcagtcagactcttcagtggtgctt
ggtgatgatgcgagaggtcagaggtcatgcgtgacagtgaccttgcgaccatccaagggt
aggcgtgatcccagcaccatcgttcccaagctggaggccaatgtctcccccagaagcctc
ccacaaagccctagagacctttatggcaagtccctgctccgcccccctctccgaaacggg
gtccggcgctctgataaaggccaccttcacacagagtgctctcgcacacaagcggtcagg
tcacacacagacagaacgcatctccaaacctccacgctgaccagaagcacctccaaacac
actcacatgggccggaaccttagatgcaactccggggagtcccaccaaaatggtaaaaag
tctcgagtggacagagcgaagccccctgcttcgtcttccttgtccagcccaatgtcccgc
aggtcgcctgagcagaacggagcgagtgagcccggctgggaaaggctagtgtgggtgtct
gtcttccgctatctgacgcgaaccgagctgtgtgtctgtatggccgtctgcaagaactgg
tacaaatgggggtgtgataagcggttgtggacgcgaatcagtttaagccgctgccagtcc
atcagtccacaggccctctctggcatcatcaaacgtcagccggtcacactggacctttcg
tgggccaacatatccaagaaacagctcacttggcttgttaaccgattaccagggttaaaa
gatctggtattgtcaggatgtagttgggtgtcaatctctgctctgagctctcccagctgt
ccattgctgcgctcgttagacctgcgctgggcggacggtgtcaaagatgcacagatccga
gagctcctcagcccaccaggcagtaataaccgatcccagctgcggaacatgcagtgtttg
aggctgtgtggtttggatgtgacggaggccactctcaggctgatcattagacacatgccc
cagctgacgaggctagagctctcacactgccccctgactgacaacgctctcaacctcctc
actgctgtgggctcctccacacgcaacacactcacacatctaaacttagcaggctgcagt
cgtctgacggatcactgtctaccgtacctgcagcgtttgtcttgtctctcggtgctggac
ctgcgcggctgtaaaggagtctcccggcaggcctgtgagaatttcatctcggaactgtct
gtcaatgctctctactgcctatcagacgacaagctcatccagaggatatcatag
DBGET
integrated database retrieval system
