Colossoma macropomum (tambaqui): 118810281
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Entry
118810281 CDS
T09004
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118810281 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118810281 (c9orf72)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118810281 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
118810281
NCBI-ProteinID:
XP_036429806
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSAACPPQSPAVAKTEVLLEGWCPLLAATFAYWDNILGPRVRHIWAPKGQGSLLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLSEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELNFYLPLHSVCVERLKHIVRKGRICMQKGYSIISMLTSEIVPIMELLSSMKTHSVPEEV
DIKDTLLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPDKVNKIVFTLCLFLTPAE
RKCSRLCRADDSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWRAASEDDISPDNLINAQDFFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGRKPFRSLRNLKTDLDL
TVEGDLNIVMAMAEKLRAGLHSFVFGKPFFTSVQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcctgcccgccacagtctccggccgtggctaagacagaggtgcttttggaa
ggatggtgccctcttctagcagctacctttgcctactgggacaacattctggggcctcgt
gtacgacacatctgggcccccaaaggtcaggggtcattactgctcagtgatggggaggtg
acttttctggccaaccacacactgaatggcgagattctgcggagtgccgagagcggcgcc
gtggacgtcaagttcttcgtcttgtcagagaaaggagtgatcatcgtctctcttatattt
gatggagaactgaagggcgataaaaacacctgcgccctgtccatcattctgcctcagtca
gagctgaacttctacctgcccctgcacagcgtgtgtgtggagaggctcaagcacattgtc
cgcaaagggcgcatctgcatgcagaagggttacagcattatctctatgttaacgtctgag
atcgttcccatcatggagcttctctcctccatgaagacccacagtgtaccggaagaagtt
gatatcaaagacacattattgaatgatgatgacattggagacagctgtcatgaggacttc
ctgcacaaagccatcagctctcatctacagacctgcggctgctccatcgttgttggcagc
aatccagacaaagtcaacaagatcgtgttcacgctgtgtctcttcctcactcccgctgag
aggaagtgctctcgactgtgccgagctgacgactccttcaaatatgacacggggctattc
gttcagggcctgctcaaggactctacagggagttttgttctgccttaccggcaggtgctg
tactctccttacccaaccactcacatagacgtggacattaacacggtgaagcagatgcct
ccatgccatgagcacacgtaccaccagcgccgctacatgagggctgagctcagcgcgctc
tggagggccgccagcgaggacgacattagccctgacaacctcatcaatgcccaagatttc
ttcacccctgacttgaatatatttcaggacgtgatgcacaaggacacactggtgaagtct
ttcatagatgaggttttcctcttgaagccaggcctgtctttgcggagtgtctacttgtcc
cattttctcctactgctgcacaggaaggctctgacactgctccgatatattgaggacgag
acccagaaggggaggaagccgttccggtcactgcgcaatctgaagactgacctggacttg
actgtggaaggtgacctgaacatagttatggcaatggcggagaagctgcgggcgggtctt
cactcctttgtcttcgggaagccattcttcaccagtgtgcaggagcgtgacctactcatg
agtttctga
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integrated database retrieval system
