KEGG   Colossoma macropomum (tambaqui): 118812026
Entry
118812026         CDS       T09004                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04115  p53 signaling pathway
cmao04210  Apoptosis
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118812026 (apaf1)
   04115 p53 signaling pathway
    118812026 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118812026 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz NB-ARC APAF1_C EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 APAF-1-like_WHD ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th CARD NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C RMC1_N Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_like eIF2A PEP5_VPS11_N Beta-prop_Nup120_160 CARD_2 WD40_RFWD3 Beta-prop_WDR11_2nd AAA_16 NACHT B-prop_COPA_B_2nd Dark_WHD WDR54
Other DBs
NCBI-GeneID: 118812026
NCBI-ProteinID: XP_036432593
LinkDB
Position
Unknown
AA seq 1262 aa
MEARARSCLLRSRATLEQDIKASYLMDHMISDGVLTGDEEERVLSKPTRREQAAALLEVL
LRKDNRAYISFYNALIRESYGDLASLLHNDLPQLSPEGEKSYSNGISPTVHAILSEGGVP
QRPVVFVNRPTLLNKVQEKLYKLQNVVGWVTVFGMAGSGKSVLAAEAVRDHALIKECFPD
GVHWLSVGQCERADLLVRMQSLCFRLEQRQISDSPLRPPSSVEEAKERLRFLMLRGFPRA
LLILDDVWDSYTLRAFDIQCRVLLTTRNRSLTDCVSGQRFSVPVESGLDEEKALEILALY
VNQKLHNLPEQARSIVKECKGSPLVVSLIGALLREFPERWGYYLRQLQKKQFQRIRKSSS
YDYEALDQAMDASLQVLKEEHRELYKDLSVLEKDVKVPAKVLSVLWGKELEDVEDVLQEF
VNKSLLFRDCNQRPYLYYLHDLQLDFLTEQNRSQLAELHSKVIRQYQQAYSKSLPTSADV
ASLYWYRFLPHHMARAGLSKELYSLMFSLDWVKNKAQIMGSAHLINDYVEYGAILDQENS
EVRLQFQEFLSLNGHQLEQRPFPDVVQLALSQPHGSEVYRQALLQAKERANRGQLYLEWV
NKSNLESLSRLVLHPHQNSVYYACFSRDGSKIASCGASKTLRVFKSTSGEKLQEILAHDD
EVLCCAFSPDDRHIATCSSDRKVKVWNVEKGTLLRVFEDEHEEQINHCQFTNTNRRVLLA
TCSNDKIINTKLWNLNKPTSQNTMFGHMEPVNHCCFSPDDTYLATSSNDGTLKLFEVQSA
NEWKSIDINSFFPENDDETSVMVKCSTWSADGTHIFCAAKNTVFMFDVETQDMLLEIRTS
RLSTVQYCQACPNSQLLALALSHYTVELWDFEANKKMAECSGHLSWVPCVQFSPNGSLLL
SSSDDQTIRLWETERVHTSSAVALKRDFDVVFNQDDITVVAADSKNRLQVRSGLTGALVF
ESVKQKSRIRCTCICRQAQAVALGMEDGALQVLEVPSGNTLATLLGHTKTIHHCLFTEDG
QTLITSSEDTTVRVWRWRTGECLVLEGHKEPVRKFHLVGFSSSSPALLSWSFDGTAKVWD
LSSGKKLQDLECHHGAVLSADISPDGQVFSTASADKTAKVWSCTSWEMVFLLKGHKACVR
SCRFSWDGKRLATGDDNGEIRLWNMLNGSLLKICSRESKDSMDSCHGGWVTDLHFSPDNK
VLVSTGGYIKWWSVERGEALQTFYTTGANLKRIHVSPDFKTFVTIDNIGILYILKQVEGG
QL
NT seq 3789 nt   +upstreamnt  +downstreamnt
atggaggcgcgggctcgcagctgtttgctgcgctccagagctactctggagcaggatata
aaggcctcctacctcatggaccacatgatcagtgacggggtcctgacaggggacgaggag
gagagggtactcagcaagcccaccagaagggaacaggcagcggcactactagaggtcctc
ctgaggaaagacaacagagcctacatctccttctacaatgcccttatcagagagagctat
ggagacctggccagtctgcttcacaatgacctgccacagcttagccctgagggtgaaaag
agctactccaatggaatctctcccactgtgcatgctattctgagtgaaggcggtgtgccc
cagaggcctgtggttttcgtgaaccgccctactctgcttaacaaggtccaggagaagctg
tacaagcttcagaacgtggtgggctgggtcactgtgtttggcatggctggttcagggaag
tctgtgctggctgcggaggcagtgagagaccacgctttaatcaaagagtgctttcctgat
ggcgttcattggctgtctgtggggcagtgtgagagagcagatctgctggtgagaatgcag
tctctgtgttttaggttggagcagaggcaaatttcagattcgcccctgaggccccccagt
tctgtcgaggaggccaaagagcgcctgcgcttcctcatgctccgcgggtttcccagggct
ctcctgattctggatgatgtgtgggacagctacactctcagggcttttgatatccagtgt
cgagtcctcttgaccactcgtaaccggagtctgactgactgtgtgagtggtcagaggttc
agtgtgcctgttgagagtggtctggatgaagagaaagctttggaaattcttgcactatat
gtaaaccagaagcttcacaatcttccagaacaggcccgcagcattgtaaaagaatgcaaa
ggctctcctctggtggtatctttgattggtgcactgttaagagagtttcctgagcgctgg
ggctactacctgcggcagctgcagaagaagcagttccagcggatacgcaagtcttcctca
tatgactacgaagctctggatcaggccatggatgccagtctgcaggtcctgaaagaagaa
caccgcgaactctacaaagacctgagtgtactagagaaagacgtcaaagtgcctgccaag
gtgctgtctgtgctgtggggcaaagagctggaggacgtggaggatgtcctgcaggagttt
gtgaataagtctctgctgtttcgggactgtaaccagcggccgtatctctactacctccac
gacttacagctcgacttcctcaccgagcaaaaccgcagtcagctagcagagctgcacagt
aaagtgatccggcagtatcagcaggcgtacagcaaaagtctacccacttcggcggatgtg
gcgtccttatactggtacagatttcttccacatcacatggcccgagccggtctgtccaag
gagctatattctctgatgttttcactggactgggtgaaaaataaggctcagataatggga
tctgcccacttaatcaatgactacgtggagtatggtgcaattctcgaccaagagaacagt
gaagtgaggctacagtttcaggagtttctgtcactgaacggtcatcagctggagcagagg
cccttccctgatgtggtgcagctggccctctctcagccccacggctcggaagtgtatagg
caggccttactgcaggcgaaggaaagggctaacagggggcagctctacctggaatgggtg
aacaagagtaatctggagagtctgtcacgactggtgctccaccctcaccagaactctgta
tactacgcgtgcttttctagagacgggagcaagattgcctcctgtggggctagcaaaaca
ctacgggtgtttaagagtacctctggagagaagctccaggagatcctggctcatgatgat
gaggttctgtgttgtgccttttcccctgatgaccgtcacatagcaacctgctccagtgac
agaaaggttaaggtatggaatgtagaaaaaggcactctgttgcgtgtgtttgaggatgag
catgaagagcagatcaaccattgccagttcactaacacaaaccgccgcgtcttgctggcg
acctgctccaatgacaaaatcatcaacaccaagctgtggaaccttaacaagccaacctct
cagaacaccatgttcggacacatggaaccagtgaatcactgttgcttctcgccagatgac
acttaccttgccacttcatccaatgatggcactctgaagctttttgaagtgcagtctgca
aacgagtggaagtctatcgacatcaacagtttctttccagagaatgatgatgaaacaagt
gttatggtgaagtgcagcacatggtcagcagacggcactcacatcttctgtgctgcgaag
aatactgtttttatgtttgatgtagaaacacaggacatgctgctggagatccgaacgagt
cgtctgagcacggtgcagtactgccaggcctgccctaacagccagctgttagccctagcg
ctgtcccactacactgtggagctgtgggactttgaggctaataagaagatggctgaatgc
agtggtcacctgagctgggttccctgtgtgcagttttctcctaatggctccctcctcctg
tcctcctctgatgatcagaccatcagactgtgggagacggagcgtgtgcacacatcttca
gctgtggctctgaagagggactttgatgttgttttcaatcaggatgacatcacagtggtg
gcagccgacagcaagaataggttacaggtgcgttccgggctgacgggtgcactggtgttt
gagtctgtgaagcagaaatcgaggattcgctgcacgtgtatttgcaggcaggctcaagct
gtggctctggggatggaggacggcgcgctacaggtgctcgaggttccttctggtaataca
ttagctacactgcttggtcacaccaaaactatccaccactgtctcttcactgaggacgga
caaactctgatcacatcctcggaagatactacagtcagggtgtggaggtggaggacaggt
gagtgcctggtattagaaggccataaggagccagtcaggaagtttcatcttgtcggtttc
tcctcttcctcacctgctctcttatcctggtcatttgatggcactgccaaggtgtgggac
ctgagctctggaaagaagctgcaggatctagagtgccatcacggtgctgtgctgtcagct
gacatttctccggatggacaagtcttctccaccgcatcagcagacaagacggctaaggtg
tggagctgtacttcatgggagatggtgttcctcttgaaaggccacaaagcctgtgtccgc
agctgccgtttctcctgggacggcaagcggctcgctactggtgatgacaacggagagatc
aggctgtggaacatgctgaatggatcgctgctgaagatctgttcccgtgagagtaaggac
tctatggactcttgtcatggcggctgggtgactgacctgcacttctctcctgataacaaa
gtccttgtgtcgactggaggatacattaagtggtggagcgtggagagaggagaagccctg
cagacgttctacaccacaggagccaatctgaagcgcatccacgtctcacctgacttcaaa
acattcgtcaccattgacaacattggaatcctgtacatcctgaagcaggtggaaggagga
cagctctag

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