KEGG   Colossoma macropomum (tambaqui): 118813018
Entry
118813018         CDS       T09004                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04145  Phagosome
cmao04514  Cell adhesion molecules
cmao04672  Intestinal immune network for IgA production
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118813018
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118813018
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118813018
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118813018
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmao04147]
    118813018
Exosome [BR:cmao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118813018
  Exosomal proteins of epithelial cells
   118813018
  Exosomal proteins of breast milk
   118813018
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig I-set C2-set_2 C2-set_3
Other DBs
NCBI-GeneID: 118813018
NCBI-ProteinID: XP_036434027
LinkDB
Position
Unknown
AA seq 241 aa
MEALLVLALMMVCAVHSQPAGFDRYGWIIGCDETSTRVSFSYNGEIAEYFDYEEKQTVMT
LPDFADPIVIADLSKDAYSAQEFCKDTLAVINDAYMNPPEELEPPWTSIYTKSDVKLKTK
NTLLCHVTDFFPPPVRVSWTKNDLNVTEGATLSPYYQNSDGTLSVFSTLSFTPEEGDVYS
CTVEHRALEQPQTRIWDVQVEQSSVFPSVVCVVGVCLGVIGAAAGIFLIFRANALCSCGL
T
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaggctctgttagtcctggcgttaatgatggtctgtgctgtccactcacagccggcg
ggttttgacagatacggctggataataggatgcgatgagacaagcactcgtgtatctttc
tcatacaatggagaaatagctgaatactttgattatgaagagaaacaaactgttatgact
ttgcccgattttgctgatcctatcgtgatcgcagacctgtctaaagatgcttacagtgca
caagagttttgcaaggacacattggcagtgataaatgatgcctacatgaacccacctgaa
gagctcgaacctccctggacctccatctacacaaaaagcgacgtgaagctgaagacaaag
aacacactcctctgtcacgtgactgactttttcccgccgccggtcagagtgtcctggacc
aagaatgacctgaacgtgacggagggcgcgaccctgagcccgtactaccagaacagtgac
gggacgttaagcgtgttctccacgctgagcttcactccagaggaaggagatgtttacagc
tgtacggtggagcatcgcgcgctggagcagccgcagaccagaatatgggatgttcaggtg
gagcagtcgagtgtgtttccctctgtggtgtgtgtggtgggggtgtgtctcggtgtgatc
ggagcagctgctggaattttcctcatcttcagagcgaatgccctctgcagctgtggactg
acttaa

DBGET integrated database retrieval system