Colossoma macropomum (tambaqui): 118813073
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Entry
118813073 CDS
T09004
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
KO
K06752
MHC class II antigen
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04145
Phagosome
cmao04514
Cell adhesion molecules
cmao04672
Intestinal immune network for IgA production
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118813073
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118813073
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118813073
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118813073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118813073
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118813073
Exosomal proteins of epithelial cells
118813073
Exosomal proteins of breast milk
118813073
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
C2-set_2
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
118813073
NCBI-ProteinID:
XP_036434109
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MFEFVSSAPIRMKLCLVLVWSVLLSTEAKIIHRDTYTLLCSDTDQKSTYRLDREELLHSD
LSKGTGTLTIPQFADLLTDEEAKDNRVTLMDNCKKHLAECVTAYKNPAEPKDAPQSSIYS
KDDVKLGTNNTLICYITGFYPPKIGVLWSRNDVKVTGGVSFSRFYPTSDGTYNMVSRLSF
IPEKGDIYTCTVKHAALDRPLTKTWDVQVALPRVGPTAFCVAGLAAGLLGVVVGTFFLVR
GKNPTENLTVNFTQNLLHCVLQRCDFFHFKLTSFVMLIALSFLSVAIIYVFFFRTSLFYN
IGPYLFRPLPVN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtttgtttcctctgcgccgatcagaatgaagctgtgtttggtcctcgtctgg
tcagttcttctctccacagaggctaaaatcattcacagggacacctacacactcctgtgc
tctgatacagatcagaagagtacgtacagactggacagagaagaactccttcactctgac
ctcagtaaggggacaggaacgctgaccataccgcagtttgcagatcttttgaccgatgaa
gaagccaaagacaatagagttactctaatggacaactgcaaaaaacacttggctgaatgt
gtgacagcttacaaaaaccctgcggagccaaaggatgccccccaaagctcaatctactcc
aaggacgatgtgaagctgggcaccaataacaccctcatctgttacattactggattctac
ccaccaaaaattggagtgttgtggagcaggaatgatgtcaaagtaactggtggagttagt
tttagtagattttatccaaccagtgatggaacctacaacatggtctctcgtctgagcttc
attccagagaagggcgacatctacacctgcactgtgaagcacgcagccctggacagacca
ctgaccaaaacatgggatgtgcaggtggctctgcccagagtgggtccgactgcgttctgt
gtagcaggtctggctgcaggactgctgggagtcgttgttggaactttcttccttgtcaga
ggaaaaaacccaactgagaatctgactgtaaactttacacaaaacttattacactgtgtt
cttcaaaggtgtgacttctttcactttaagttaacctcatttgtgatgttaattgcactg
tcctttctttctgtggccatcatttacgtcttctttttcagaacaagtttgttctataat
atagggccttatttattcaggcctttaccagttaactga
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