Colossoma macropomum (tambaqui): 118813828
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Entry
118813828 CDS
T09004
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118813828 (traf1)
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Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
TRAF2_zf
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
DUF3540
Motif
Other DBs
NCBI-GeneID:
118813828
NCBI-ProteinID:
XP_036435278
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MASCPGENEFPCGFPQSICDDLPPLHYLCSSCNNVLNEALQTQCGHRYCRACVLWLIRNN
KDLVCTKCKEDPGSESDSSMMLTLDHFFNDMAINKEIQELRVHCVNQGCPWRSTLKDFED
HQSQCEYALIPCNVGCGLMVLRRTLAMHLDKGCPNNKSMCQTCSCALTPAELQKHSCCNG
NDKKPAKAEKRQKDNKQASSKRKEPCVFFEVGCTFKGNTEKVHEHESCNTAGHLQLLLEA
IRGLQSSVPSPPERSVQYPALDLLLQGQTVAPLSPQTNGDLETDGGDAGASDKALSLHDD
QAELEVGQQLHALQQRLQIMENIISALNREVEKTQLTVVALERDNHNTMQVVQHLETVVA
EQQQRLIRKDMHIASLQQSISAQQDVSYDGTFLWRICDVSQKLREAGTGQRSSQYSPAFY
TSRYGFKVCMRLYMYGDGVGKGTHISLFFVIMKGEYDPLLSWPFKHKVTFFLIDQNQREH
VIDAFRPDLSSVSFHRPISEMNVASGCPLFCPLAKLRSPKHAYLKDDTLFIKCVVDSSA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgccccggcgagaacgagtttccctgcggtttccctcagagcatctgcgac
gacctgccgcctctacattacctctgcagcagctgcaacaacgtgctgaacgaggcgctc
cagactcagtgtggacacagatactgcagagcctgcgtgctctggcttatcaggaacaac
aaggatctggtgtgtacaaagtgtaaagaagaccccggcagtgagagtgactccagcatg
atgctgacgctggaccacttcttcaacgacatggccatcaataaagagattcaggagctg
agggtgcactgtgtgaaccaaggctgtccctggaggagcaccctcaaggactttgaggac
caccagagtcagtgtgaatatgccctgatcccctgcaatgttggctgtggcctgatggtg
ctgaggaggactctggccatgcacctggacaaaggctgtcccaacaacaagagcatgtgc
caaacgtgctcctgtgcactgacccctgcagaactgcagaagcattcatgttgcaacgga
aatgacaagaagcctgcaaaagcagagaaacgacaaaaggataataagcaggcgagctct
aagcggaaagagccatgcgtcttctttgaggtcggatgcacatttaagggaaacacagaa
aaggtgcatgaacatgagagctgcaacaccgctggtcatctgcagctcctcttggaggcc
atcaggggcctacagtcgtccgtgccctctccgcctgagaggagtgtgcagtacccggcc
ctggacctgctccttcagggccagaccgtggcccccctcagccctcagactaacggagat
ctggagacagacggcggggacgcgggggccagtgacaaggccttgagcctgcatgatgac
caggctgagctggaggtgggccagcagctgcatgccctgcagcagagactgcagatcatg
gagaacatcatttcagcacttaaccgagaggtggagaagacccagctgaccgtggtggca
ctggaaagagacaatcacaacaccatgcaggtcgtgcagcacttagagaccgtggtagcg
gagcagcagcagagactgatcaggaaagacatgcacatcgcctcattacagcagagcatc
agcgcgcagcaggacgtctcctatgacggcaccttcctctggaggatctgtgatgtcagt
cagaagctgagagaggcaggcacagggcagaggagcagtcaatactctccagccttctat
acatccaggtacggattcaaagtgtgcatgcggctgtacatgtatggagacggagtgggg
aaagggacacacatctctcttttctttgtcattatgaaaggagagtatgacccacttctt
tcatggccctttaagcacaaggtgacgttcttcctcattgatcagaaccaaagggagcac
gtgatcgacgcgtttcgtcctgatctgtcctccgtgtctttccaccgacccatctcagag
atgaacgtggccagcggctgccctctcttctgtcccctggcaaagctacgctcgcccaag
catgcctacctcaaggacgacacactctttatcaagtgtgtggtcgactcctccgcctaa
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