Colossoma macropomum (tambaqui): 118814555
Help
Entry
118814555 CDS
T09004
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
cmao04137
Mitophagy - animal
cmao04141
Protein processing in endoplasmic reticulum
cmao04210
Apoptosis
cmao04217
Necroptosis
cmao04621
NOD-like receptor signaling pathway
cmao04622
RIG-I-like receptor signaling pathway
cmao04920
Adipocytokine signaling pathway
cmao05132
Salmonella infection
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118814555 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118814555 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118814555 (traf2b)
09143 Cell growth and death
04210 Apoptosis
118814555 (traf2b)
04217 Necroptosis
118814555 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118814555 (traf2b)
04622 RIG-I-like receptor signaling pathway
118814555 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118814555 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118814555 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
118814555 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118814555 (traf2b)
04121 Ubiquitin system [BR:
cmao04121
]
118814555 (traf2b)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118814555 (traf2b)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118814555 (traf2b)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118814555 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Paramyxo_NS_C
zf-RING_UBOX
zf-C3HC4_4
TRAFD1-XIAF1_ZnF
zf-RING_4
zf-C3HC4_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118814555
NCBI-ProteinID:
XP_036436100
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNSITGKWKGMARPSLISSVDSTLPGIPRQVLSVSMEPKYQCQQCKEVLRKPFQAQCGHR
FCVSCFKQLTSSGPIPCEACRAEGIFEVDLSMLNFCEAFPDNAARREIDSLPAKCPNEGC
SWTGTLKDYEVQHEGRCEFERVKCEACQMFILLTDKDRHNERECEARTLNCKYCKVSFSF
KDIKAHDEICQKFPIQCKDCGKKKIPREKFPEHSKSCAKSKSACQFSEIGCRAVVDNGKQ
HEHEQSSITEHLRLMLTVLSSVRLHSDGPGEWQEDSGLGLYRGPEDAAPPGAHAAAHNAA
GGPGVQQKMTALENIVCVLNREVERTALRLEALTRQHQLDQEKIENLSNKVRQLERTLTM
RDLQLAESEQALRELQFCTYDGVFVWKISDFSRRRQDALAGRSPAMFSPAFYSSKYGYKM
CLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPD
ISSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcattacgggtaaatggaagggaatggcacgtccatctttgatctcctcggtg
gactccacattgccaggaataccacggcaggtactgtccgtgtctatggaaccgaaatac
cagtgccagcagtgtaaggaggttcttaggaagcccttccaagcccagtgtggacatcgc
ttctgtgtatcctgttttaagcagctcaccagctccggccccataccctgtgaagcctgc
cgtgccgagggtatatttgaagtggatctgtctatgcttaatttttgtgaggcatttcca
gacaatgctgctcggagagaaattgatagcttgcctgcaaaatgcccaaatgaaggctgt
agttggactggaacactgaaagactatgaggtgcagcacgaaggccgatgtgagtttgag
cgtgtgaagtgtgaagcatgtcaaatgtttatcctacttaccgacaaagaccgtcacaat
gagagagagtgtgaagccaggactctgaactgcaagtactgcaaagtctccttcagcttc
aaagacattaaggctcatgacgaaatttgccagaaatttcccatccagtgcaaagactgc
ggtaaaaagaagatccccagagaaaagtttcctgagcatagcaaatcatgtgcaaagtcc
aagtcagcgtgtcagttcagcgaaattggctgcagggcggtggttgacaatggcaaacag
cacgaacacgagcagagcagtatcactgagcacctgcggctcatgctgaccgtgctgtct
tctgtgcgcttgcactctgatgggccaggagagtggcaggaggactctggtcttgggctg
taccgcggacctgaagatgcagctccaccaggggcccacgctgctgcccacaatgcagcg
ggaggccccggtgtgcagcagaagatgacagcactggagaacatagtgtgtgtgttgaat
cgagaggtggaacgcaccgccctcagactggaagctttaacgcgccagcaccagttggac
caggagaagatcgagaacttatccaataaggtgcgtcagctagagcgaaccctgaccatg
cgtgatttgcagctggctgaatctgagcaggctctacgagaactacagttctgcacttac
gacggtgtgttcgtttggaaaatatccgatttctctcgtcgcaggcaagacgcgctagct
ggccgttcccccgccatgttctcaccagccttctactccagcaagtatggctataaaatg
tgtttgaggctgtatttgaacggagatggcacaggcagaggtacacacctctcactcttc
ttcgtggtgatgaggggaaaatacgacgctctgctcaagtggcctttcagccaaaaggta
actctgatgctgttagaccagaataaccgtgagcacatcatcgatgcgttcagacctgac
atcagctccacatcttttcaaagaccaattagtgagatgaacatcgccagtggctgccca
ctcttctgccccctagctaagttggcaggcaagagttcctatctgcgagatgataccatt
ttcattaaagcaatagtagatctaactgggctgtaa
DBGET
integrated database retrieval system
