Colossoma macropomum (tambaqui): 118815648 Help Entry 118815648         CDS       T09004                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao04115   p53 signaling pathway cmao04145   Phagosome cmao04148   Efferocytosis cmao04350   TGF-beta signaling pathway cmao04510   Focal adhesion cmao04512   ECM-receptor interaction cmao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cmao00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     118815648 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118815648 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     118815648 (thbs1b)    04148 Efferocytosis     118815648 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     118815648 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     118815648 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     118815648 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmao04131]     118815648 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cmao00536]     118815648 (thbs1b) Membrane trafficking [BR:cmao04131]  Endocytosis   Phagocytosis    Opsonins     118815648 (thbs1b) Glycosaminoglycan binding proteins [BR:cmao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118815648 (thbs1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF EGF Laminin_G_3 TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  118815648 NCBI-ProteinID:  XP_036437802 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MKLTGIFLLVMLWSCEGARVAESRDDNSVYDLFELVQVPKKNHGVTMVKGDDPYSPAYKI LNPDLIPPVPESAFRDLMYSVQAERGFLLLVNFKQFRRTRGALLTVEKLDGSGPVFEIIS NGKANTLDVVFSTENKQQVVSIEDADLATGHWKNITLFVQDDRVHFYVGCEEINIAELDA SIQNILTPDTPGVANLRIGKGAVNDKFMGVLQNVRFVFGTTLEAILRNKGCQSSIMTDTI TLDNPVNGSRPAIRTDYTGHKTKDLQMICGFSCDDLASMFKELKGLGVVVQELSNELRKV TDDNNLLKKQMGIYGGVCLHNGIVHKDKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGNWSHWSPWSSCSVTCGSGVITRIRLCNSPTPQLGGKDCQGQGR QTEKCEKSPCPINGGWGPWSPWDACSATCGGGVQNRKRLCNDPPPKHGGKDCVGDATVTQ LCNKQACPIDGCLSNPCFAGTQCTSFPDGSWKCGKCPAGYTGNGINCKDINECKEVPDAC FEFNGVHRCENTEPGYNCLPCPPRYSGPQPFGRGVEEAAAKKQVCTPRNPCLDGTHDCNK NARCNYLGHFADPMYRCECKPGYAGNGYICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGIGDACDDDDDDDGIPDDRDNCPFIFNPRQYDYDRDEVGDRCDNCPY NSNPDQTDTDSNGEGDACAVDIDGDGILNERDNCPYLYNVDQRDTDLDGVGDQCDNCPLE HNPDQLDTDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLAFNPDQLDTDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagttaacaggaatatttttgttagtgatgctgtggagctgcgagggcgccagagtg gcagagagcagagatgacaacagcgtctacgacctgttcgagctcgtgcaggtgccgaag aagaaccacggcgtgaccatggtgaaaggagacgacccctacagtcccgcctacaaaatc ctgaaccccgacctgatccccccggtgcccgagagcgccttcagggacctcatgtactcc gttcaggcggagaggggcttcctgctgctggtcaacttcaagcagttcaggcgcaccaga ggcgcgctgctgaccgtggagaagctcgacggctccgggcccgtcttcgagatcatctcc aacggcaaggcgaacacgctggacgtggtcttctccaccgagaacaagcagcaggtggtg tccatcgaggacgcggacctggccacgggccactggaagaacatcacgctcttcgtgcag gacgaccgcgttcacttctatgtgggatgcgaggagatcaacatcgccgagctggacgcg tccatccagaacatcctgacccccgacaccccgggggtggcgaatctgaggatcggcaag ggggcggtgaacgacaagtttatgggtgtgctccaaaacgtgcgatttgtttttgggaca acgctggaagcaattttgcggaataaaggatgtcaaagctcaatcatgactgacacgatc accctggacaatcccgtgaatggatccaggccagccatcaggaccgactacactggccac aagacaaaagatctacagatgatttgtggcttttcctgtgacgacttagctagcatgttt aaggaactaaagggtcttggtgtggtggtgcaagagctgtccaacgagcttcgtaaagtg acagatgacaacaatctgctcaagaaacagatgggaatttatggtggtgtctgtctccac aatggcattgtgcataaggacaaggaggaatggacagtggacgactgcactgagtgcact tgccaaaactcagcgacagtgtgtcgtaagatctcctgtcccctgattccctgtgccaat gcaactgtgcctgatggtgaatgctgcccccggtgtggaactccgagcgactctgccgag gatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggaaggggcatt cagcagcgtggccgctcctgcgaccgcatcaataacaactgcgagggcacgtctgtgcag accagagactgctacctccaggagtgcgacaagcgcttcaagcaagatggcaattggagc cactggtcaccatggtcctcttgctcagttacttgtggatctggcgtcatcacacgcatt cgtctctgcaactctcctacaccacagctgggaggaaaagactgccagggtcaaggcagg cagactgagaagtgtgagaagtcaccatgtccaatcaatggtggctggggaccatggtcg ccctgggatgcctgctcggctacctgcggaggaggcgtccagaaccgcaaacgcctttgc aatgatccgccacccaagcatggaggcaaagactgtgtgggagatgcaacagtaactcaa ctctgcaataagcaggcctgccctattgatggatgtctgtccaatccttgctttgctgga acccagtgcacgagcttcccagatggttcatggaagtgtggaaaatgtccagcaggttac actggcaatggcatcaactgcaaggatattaatgagtgcaaggaggttcctgatgcttgc tttgagttcaatggagtccacaggtgtgaaaatacagaacctgggtacaactgcctgcct tgtcctcctcgctacagtggcccacagccatttggccgtggagtggaggaagctgctgca aagaaacaggtgtgcacacctcgtaacccctgtcttgatggaactcatgactgcaataag aatgcccggtgcaactacctgggacattttgcagatccaatgtaccgctgtgagtgcaag cctggctatgctgggaatggatacatctgtggagaagacactgatttggatggctggcct aatgctgaccttgtgtgtgtggagaatgccacctatcactgcaagaaggacaactgcccg aaccttccaaactcaggccaggaggactatgacaaggatggaattggtgatgcttgtgat gatgatgatgacgacgatggcattcctgatgacagggacaactgcccattcatcttcaat cccagacagtacgactatgatcgcgatgaggtcggagatcgttgcgacaactgtccatac aacagcaaccctgaccagactgacacggacagcaatggcgaaggcgatgcatgtgccgtg gacattgacggagatggtattctgaatgagagggacaactgtccttatctgtacaatgtg gatcaaagggatacggatctggatggggttggtgaccagtgtgataactgccctcttgag cataatcctgaccagctcgacacagactctgaccgtgtgggagataagtgcgacagcaac caggacatagacgaagatggccatcaaaacaacctggacaactgcccttacattcccaat gccaaccaggctgatcatgacaaggatggcaaaggagacgcttgcgattatgatgatgat aatgatggcattcctgatgataaagacaactgcagactggctttcaacccagatcagttg gacactgatggtgacggacgtggtgatgcttgtaaggatgactttgaccaggacaatgtt ccagacatctatgatgtgtgcccagagaactttgacatcagtgagacagacttccgcaag ttccagatggtgcctctggaccccaagggcacatctcagattgatcccaactgggttgtc cgtcatcaaggcaaagagttggttcagacagttaactgtgaccctggcattgccgttggt tttgatgagttcaatgcagtggacttcagcgggaccttcttcattaacacagagcgagat gacgactatgctggatttgtgtttggttaccagtccagctctcgcttttatgtggtgatg tggaagcagattactcagacctactggtccagcacacccaccaaggcacagggctattca gggttgtccatcaaagtagtcaattccaccactggaccaggtgaacacctaaggaacgct ctctggcacactggggatactccaggacaggtgcgcactctctggcatgaccccaagaat gttggttggaaggattttactgcttatagatggcatctgactcacaggccaagaacagga cacataagagttgtcatgtatgaaggaaagaagatcatggcagattctggaagaatctat gacaaaacttacgcaggtggacgactaggtctctttgtcttctcacaagagatggtatac ttctcagacctcaaatatgaatgcagagatgtataa

DBGET integrated database retrieval system