Colossoma macropomum (tambaqui): 118817529 Help Entry 118817529         CDS       T09004                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao04010   MAPK signaling pathway cmao04120   Ubiquitin mediated proteolysis cmao04140   Autophagy - animal cmao04144   Endocytosis cmao04620   Toll-like receptor signaling pathway cmao04621   NOD-like receptor signaling pathway cmao04622   RIG-I-like receptor signaling pathway cmao05132   Salmonella infection cmao05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cmao00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     118817529 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     118817529 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     118817529 (traf6)    04140 Autophagy - animal     118817529 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     118817529 (traf6)    04621 NOD-like receptor signaling pathway     118817529 (traf6)    04622 RIG-I-like receptor signaling pathway     118817529 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     118817529 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     118817529 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmao04131]     118817529 (traf6)    04121 Ubiquitin system [BR:cmao04121]     118817529 (traf6) Enzymes [BR:cmao01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118817529 (traf6) Membrane trafficking [BR:cmao04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     118817529 (traf6) Ubiquitin system [BR:cmao04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     118817529 (traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 TRAF6_Z2 TRAF3_RING Sina_ZnF U-box RING_XB3-XBAT31 zf_UBZ DM zf-RING_11 ATG16 SlyX zf-TRAF_2 Motif Other DBs NCBI-GeneID:  118817529 NCBI-ProteinID:  XP_036440206 LinkDB All DBs Position Unknown AA seq 543 aa AA seqDB search MACSDTKSSLDDSCNEYMWQSSCAAAMEKERESYLSPTENPSTLSVSASLQPDQQGYDVD FDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLTEDQLFP DNFAKREILSLTVRCRNVGCNEKMELRRLENHVPHCKFATVPCPQCQESVWKSELEEHIN HQCLRRLVTCPDCAASIMFAEKQFHEQMCPFANTVCEYCNLELIRDQLASHCDTDCLKAP VACTFSMFGCREKMMRNDLALHMQEFTQMHMRYMAEFLRNQTINGFIPSSSAPTSCPTDE HSASARPAEQCQCSQDLLQLRETVLQLESRLVIQDQKLRELSIRNETQSTQMTELRKKLA LLEESTRELEAQQYQGVYVWRLDGFSLHLRSQEAGHPVVLHSPPFYTGRPGYKLCLRLHL QTPSAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQTEGQHHVEVMETKPDLQA FQRPTVQRNPKGFGYVTFLQLQALRQRGFLKDDVLLVRCEVTPRFDASLRREGVQPRGPE PSL NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atggcgtgtagtgacacaaaatccagtctcgatgattcgtgcaatgagtatatgtggcag tccagctgtgcggcagctatggagaaggagcgggagtcctacctgagccccacagagaac ccctccaccctgagtgtgtcagccagcctccagccagaccagcagggctatgacgtcgat tttgaccccccactggagagcaagtatgagtgtcccatctgcttgatgggcctgaggtca gctgtgcagacaccatgtggccatcgattctgcaatagctgtattaagaaatccatcagg gacacagggcagaaatgtccagttgacaatgaagtgctgacagaggatcagcttttccct gataactttgccaagagggaaattctgtctctcaccgtacgctgccgcaatgttggctgt aatgagaaaatggagctcaggcgcttggagaatcatgtgccccactgtaagtttgccaca gtgccttgccctcagtgccaggaatcagtgtggaagagtgagctggaagagcacatcaac catcaatgtttacgacgcctggtcacttgccctgactgtgcagcaagcatcatgtttgct gaaaaacagtttcatgagcagatgtgtccctttgcgaatacagtgtgtgaatactgtaac ttggagctcattcgggatcagttggcgtcccactgtgacacagactgtctgaaagctccc gttgcctgtactttcagcatgtttggctgtcgagaaaagatgatgagaaacgacctggcc cttcacatgcaagagttcacacagatgcacatgcgctacatggctgaattccttcgtaac cagacaataaacggcttcatcccttcatcttctgccccgacgtcttgtcccacagatgaa catagtgcgtctgctaggccagcggagcagtgtcagtgtagccaggacctgcttcagctg cgtgagactgtcctgcagctggagagtcggctggttattcaggaccaaaaactgcgggag ctgagcatccgaaacgagacgcagtccactcagatgactgagctgcgcaagaagctggcc ttgctggaggaatccacacgtgaactggaggcccagcagtatcaaggtgtctacgtatgg cggctggatgggttttcactccatcttcgcagccaggaagcaggccaccctgtggtcctc catagcccacccttctacaccggtcgaccaggctataaactctgcctccgactgcacctc caaacccccagtgctccccgttgttccaactacatctctctatttgtgcacaccatgcag ggggagtttgacagccagctatcctggccacttcagggcaccatccgacttgctgtgctg gaccagacggaggggcagcaccatgtggaggtgatggaaaccaagcccgatctccaggcc ttccagaggcccacggtccagcgcaaccccaaaggcttcggctacgtcaccttcttgcaa ctgcaggccttgcgtcagaggggcttcctgaaagacgatgtgttattggtacgctgtgag gtcacgccacgctttgacgcgagcctgaggagggagggagtgcagcccagaggcccggag ccatcactttga

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