Colossoma macropomum (tambaqui): 118817676
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Entry
118817676 CDS
T09004
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118817676 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cmao04052
]
118817676 (bdnf)
Cytokines and neuropeptides [BR:
cmao04052
]
Cytokines
Growth factors (RTK binding)
118817676 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
118817676
NCBI-ProteinID:
XP_036440418
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MQGCACGGTFVQLMSREPAGFFQQVRRVMTILFLTMVISYFSCMRAAPMREVPGVQGGAH
RGAEGYLGAAAAAVASASRGHGTPQSGGGLPSLTDTFEQVIEELLEAEGGAEEDAAGAMQ
HLGPGANQGQGGGGPGAAAAAAVAAESKDVDMYASRVMLSNQVPLEPPLLFLLEEYKNYL
DAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDKKTAIDMSGQTVTVLEKVPVANGQL
KQYFYETKCNPLGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKRKIGWRFIRIDTSC
VCTLTIKRGR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttgcgcgtgtggcggaacatttgtgcagctgatgagcagggagcctgccgga
tttttccaacaggtcagaagagtgatgaccatcctgttccttactatggttatttcatac
ttcagttgcatgagagctgcgcccatgagagaggtcccgggcgtgcaggggggggcccat
cgaggcgccgagggctacctgggggctgccgctgccgctgtggcttcggccagccggggc
cacgggactccacagagcgggggtgggctgccctcgctcacggacactttcgagcaggtg
atcgaggagctgctggaggcggaaggaggtgcggaggaggatgcggctggggccatgcag
cacctggggcctggggccaaccagggccagggaggggggggtcccggggcagccgcagca
gcagcagtggcagccgaatcgaaggacgtcgacatgtacgcctcacgggtgatgctcagc
aaccaagtgcctttggagccgccgttgctctttctcttggaggaatacaaaaactacctg
gacgccgccaacatgtccatgcgcgtgcggcggcactcggaccccgcgcggcgcggggag
ctcagcgtgtgtgacagtattagccagtgggtgacggccgtggacaaaaagacggccatc
gacatgtccggccagaccgtcaccgtgctagagaaggtcccggtggccaacggtcagctg
aagcaatacttttacgagaccaaatgcaaccccctgggttacacaaaggagggctgccga
ggaatagacaagcggcactataactcgcaatgccggacaacccagtcgtatgtgcgagcc
ctcaccatggatagcaaacggaagatcggctggaggtttatacggatagacacttcgtgt
gtatgcacattgaccattaagagggggagatag
DBGET
integrated database retrieval system
