Colossoma macropomum (tambaqui): 118820006
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Entry
118820006 CDS
T09004
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04110
Cell cycle
cmao04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118820006 (rb1)
04218 Cellular senescence
118820006 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118820006 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118820006 (rb1)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118820006 (rb1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
118820006 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
118820006
NCBI-ProteinID:
XP_036443988
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MPPKRRTAGTPSREQKSGSRKSSSPDTKHSNVVTPEKHEEKDLEFITLCKDLLVTNLVCD
NAWAIWESVAKSAENVNGSNKPLWGACIFISAVDMEDMCFTFTELQKAVGLSVKQFFNLV
RKMDENVDTISPKVNSAVTKLEKKYEVSLALYQRFVKTCAKIYSAPDEVKRQEILHSSWI
MFLLAKGTVLQMEDDLVIAFQLLLCVLEFCTKRCPSTLLQPLYKSAISTTAQSPPTRSSR
RSKAKARPPEVDVQLLETLCKESDCSVDEVKNVYQSSFCAFLDSMNLTGSQELPTQALVD
TFSNEYEKLYHKNKDFDARLFLVDDETLSLGKVNTTTVEMTPRKNQSGEESVPIPPQTPI
RAAMYSIQQLRGELTSASDQPSGNLIVYFKNCTVDPSEEITKRVEQLGQIFCQKFAEAVG
QRCEGLGKERFTLGVQLYYKVMESMLKSEEKRLSVQNFSKLLNNATFHTSLLACALEVVM
ATYVGNSLKNGNENGNETDLCFPWILDVFQLYAFDFYKVIESFIKAEPTLKHNMIEHLGR
CEQQIMESIAWKADSPLFELLRQSREEGPGEQAEPPATLNQPLQHNHTAADLYLSPLRPS
RQVLAAEVDTSAVPSSQPPVPGIRQHRSNSLSLFYKKLYRMAYLRLKMLFSPLLTSHPEL
EHIIWTLLQHTLQNEYELMKDRHLDQLMMCAMYAICKVKNVDLRFKTIVTAYKELPNTNQ
EIFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPHIPRSPYKYPSSP
LRVPGGNVYISPLKSGRMTPSVMTPRSRILVSIGESFGTSDKFQKINQMVSSTDWSLKRR
LEGDSTPKPLKRLRFDVDGQDEADGSKSSGESTLIQKLAEMSSARSRMQEQKLKEEAEKE
DPEP
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaggcgcaccgccgggaccccgagcagggagcagaagtccggcagcagg
aagagctcctctccggacactaagcacagcaacgttgtcaccccagaaaagcatgaagag
aaggatcttgagttcataaccctctgtaaggacctcttggtgaccaacttggtgtgtgat
aatgcatgggcaatttgggagtcggtcgcaaagtcagcagagaatgtaaatggctcaaac
aagccactttggggagcatgcatattcatttcagcagtggacatggaagacatgtgcttt
acctttacagaacttcagaaggcggttggtctgagtgtgaaacagttctttaacctagtg
aggaagatggatgagaatgtggacaccataagccctaaagtgaactctgctgtcacaaaa
cttgagaagaagtatgaggtgtcactggcactctatcagcgatttgtgaagacatgtgct
aaaatctactctgcgcctgatgaagttaagagacaagagattttgcacagtagctggatt
atgttccttttggccaaaggaactgttctgcagatggaagatgacctggtgatagccttc
cagttacttttgtgtgttttggagttctgcaccaagcgctgcccgtccactcttcttcag
cctctgtacaagtcagccatcagtacaacagcccagagccctccaactcggtcctctaga
cgtagcaaagccaaggctcgtccccctgaggtggacgtgcagttgcttgagacactctgc
aaggaaagcgactgtagtgtggatgaggtgaaaaatgtgtaccaaagcagtttctgtgcc
ttcttggattccatgaacttgacaggatcacaggagcttccaactcaggcattggtggac
actttctccaatgaatatgagaaactataccacaaaaacaaggactttgatgcaagactc
ttcttggttgatgatgagacactcagcttaggcaaagtgaacactacaactgtggagatg
acccccagaaagaatcagtctggtgaagagagtgttcccattccaccacagaccccaatc
agagctgctatgtattcgatacagcagctgaggggtgaactgacctcggccagtgatcag
ccttctggcaatctcattgtttacttcaagaactgcactgtagacccatcggaagagatc
actaagcgagtagaacagctgggtcagatcttttgccagaaatttgctgaagctgttggc
cagcgctgtgaaggcctgggcaaagagagatttacacttggtgtccagctctattacaaa
gtcatggagtcaatgctgaaatcagaggagaagaggctctctgtgcaaaatttcagtaaa
ctcctcaacaatgctacattccatacctcgctccttgcctgtgcactcgaggttgtcatg
gcaacctatgttggaaattccctgaagaatgggaatgaaaatgggaatgagactgacctg
tgcttcccctggattctggacgttttccagctttatgcttttgacttctacaaagtgata
gagagttttatcaaggcagagcccaccctaaagcacaatatgattgaacacttgggccga
tgtgagcagcagatcatggagagcattgcgtggaaagcggattctcctctgtttgagctc
ctgaggcagtctcgtgaggaggggcctggtgaacaagcggagcctcctgccactctgaac
cagcctctacagcacaaccacactgctgctgatctatacctatccccactgcggcccagt
cgtcaagtcctggctgcagaggtagacacttcagctgtgccctcgtcccagcctcctgtc
ccaggcatcagacaacaccgttccaactctctgagcctcttctacaaaaaactatacaga
atggcctacctgcggctgaaaatgcttttctcacccctgctgacttctcatcctgagctg
gagcacatcatatggactttacttcagcacacgctccagaatgagtatgagctcatgaaa
gacagacacctagaccagctcatgatgtgcgctatgtatgccatatgcaaggtaaagaat
gtggatttgcgctttaagacgattgtgaccgcatacaaagagcttcccaatacaaaccag
gagatcttcaagcgtgttttgatcagagaaggccagtatgactccatcattgtcttctac
aacctggtgtttatgcagaagttgaagaccaatattctgcagtactcctctcctcggcca
cctcccctgtctcctatacctcatatcccccggagcccatacaaataccccagctctccc
ctgagagtgcctggcgggaatgtctacatctcacctttgaagagcggccgcatgactcca
tcagtcatgactcctcgatctaggatccttgtatcaatcggcgaatcgtttgggacatcg
gacaagttccaaaagatcaatcagatggttagcagcactgattggtccctgaagaggagg
ctagaaggagactccacccccaaacccctgaaacgattacgctttgatgtggatggacaa
gatgaggctgatgggagtaaatcaagtggcgagtctacactgatccagaagctggcagaa
atgagctcagctcggagccgcatgcaggaacagaaactgaaggaggaggctgagaaagag
gaccccgagccctga
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