Colossoma macropomum (tambaqui): 118821516
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Entry
118821516 CDS
T09004
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03272
Virion - Hepatitis viruses
cmao04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
118821516 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118821516 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118821516 (ldlra)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118821516 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_3
hEGF
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
118821516
NCBI-ProteinID:
XP_036446057
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MGKALFLLFVVFVLSPVQTDAAACDSRNFQCGNGKCITMRWMCDGTDDCGDGTDELPAAC
LSKTCRPSEFSCGGRLNQCVPNSWKCDGNADCENGADEASCGPRQCLSAEFRCANGQCVS
RAFVCDEEADCDDGSDEVHCLPSTCGSSSFRCNNSACLPRLWACDGDMDCPDGSDEWPQN
CGVRPSVPPSRSRPCSILEFHCGSGECIHSSWRCDGEADCLDRSDEKNCSLSTCRPDEFQ
CGDGSCVHGSRQCNQVYDCKDMTDELGCVNASHCEAPSKFKCRSGECISMDKVCNKQRDC
RDWSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCSSGFRLVDKKHCEDIDECANPD
TCSQICVNQVGSYKCECEEGYQLDPATKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRV
ISRLKNVVALDVNIATKEIFWCDLSLKKIYRAPMDSASDSSQHSVVIGSGVEAPEGIAID
WIHGNIYWTDSIRGTISVATADGKKHKTLFAKDLAKPRAIVVDPIKNFVYWTDWGTPAKI
ERGGLNGVDRSALVTDNIIWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGSRRTLIIDH
GRLAHPLSVTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLFHNLKQPR
AVNWCMVGNGGCEFLCLAAPQVSRFSPKYTCACPDNMMLDTDMRKCVPAVPTTVPPVQPK
TSATAQPKKPTTTVPPTTKASALSTTTPMPVHTQPKDGVAETLSTNTPSEVSTQTSKDDH
SGVAAAVNKTSPTSVTLYIALPLGMLCLLGIGAVLLWRTWKLKNTNSIHFDNPVYQKTTE
DKVHICRNFNSDGYSYPPRQIVSLEDEI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcgttatttctactcttcgtggtatttgtattatctcctgttcaaacagat
gctgctgcatgtgactccaggaatttccagtgtggcaatgggaagtgtattacaatgagg
tggatgtgtgacggtacagatgactgtggtgatggcactgatgagctccctgctgcctgc
ttgtcaaagacatgcaggccgagcgagttcagctgtggtggacgactaaaccaatgtgtg
cctaacagctggaaatgtgatggcaatgcagactgtgagaacggtgcagatgaggctagc
tgtggtcccagacagtgtctcagtgctgaattccgctgtgccaatggccagtgtgtgtct
cgtgcatttgtgtgtgacgaagaggcagactgtgatgatggcagcgatgaagttcactgc
ctgcccagcacctgcggctcatcttccttccgctgcaacaactcagcgtgtcttcctcgc
ctgtgggcctgtgacggagatatggactgtcctgatggttcggatgagtggccgcagaac
tgtggagtccggccttcagtacctcccagcaggagtagaccctgctccattctggagttc
cactgtggcagtggagaatgcatccacagcagctggagatgcgacggagaggctgactgt
ctggatcgatcagatgagaaaaactgctctttatccacatgccgaccagatgagtttcag
tgtggtgatggatcatgtgttcatggcagccgccagtgcaatcaggtctatgactgtaaa
gacatgactgatgaactgggttgtgtcaatgcatcccattgcgaagctccatccaagttt
aaatgccgcagcggtgaatgtattagcatggacaaagtttgcaacaagcagcgtgactgt
agggactggtctgatgaaccactgcgtgagtgtgattctaacgagtgtctgtacaacaat
ggtggctgctctcatatctgtaacgacctaaagattggctacgagtgcttgtgctccagt
ggattccgcttagtggacaagaagcactgtgaagacattgacgaatgtgctaatccagac
acttgcagccaaatctgtgtaaaccaggtgggcagctacaagtgtgagtgtgaggaaggc
taccagttagacccagcaaccaaagcctgcaaagctattggaactatagcctacctgttc
ttcaccaaccgccatgaggtgagaaagatgactctggatcgcagtgaatacacacgtgtc
atttctcgcctgaagaacgtagttgcactggacgtgaacattgccaccaaggagatcttc
tggtgtgacctgtctcttaaaaagatttacagagctcccatggactcagcatcagactcc
tcccagcacagtgttgttattggcagtggcgtggaagcacctgaggggatcgctatagac
tggatccatggtaacatctactggacagacagtattcgtggcacaatctctgtagcaaca
gctgatgggaagaagcataagacactgtttgcaaaagacctggccaagccaagagcaatt
gtggttgacccaattaagaactttgtatactggacagactggggaacaccagctaagatt
gagaggggtggattgaatggagttgaccgcagtgcactagtgactgataacattatctgg
cccaatgggataactctggatctgttgaaccagcgcctgtactgggtggactccaaactg
cacactctctccagcattgatgtacagggcggcagtcgccgtacactcattatagaccat
ggcagattggcccacccactgagcgtcactgtttttgaggagaaagtattctggactgat
gttagcaacaatgctatcctgagcgcaaaccgtgtgacaggaggagacatcacaaaagtg
gcagagcacctctcatctcccgaggacattgtgctgttccacaacctcaagcaaccccga
gctgtaaactggtgcatggttggcaacggcggatgcgagttcctgtgtttggctgccccg
caagttagcagattctcaccaaagtacacgtgtgcctgccctgacaatatgatgctggac
acggatatgaggaaatgtgtccctgctgtgccaacaacagtgccaccagtccagcccaag
acttctgctacagctcagcctaaaaaacctacaaccactgtacctcctactaccaaagca
tcagctctgagcaccaccactcctatgcctgttcacacccagcccaaagatggtgttgcg
gaaaccctgtcaaccaacactccttctgaggtgtccacacagacgagtaaggatgaccac
agtggtgttgctgcagccgtgaacaagacatctccaacatcagttactctttatattgca
ttgcccttgggcatgttatgtcttcttggaattggagctgttttgctgtggaggacctgg
aagctgaaaaacaccaacagcattcactttgacaacccagtctaccagaagaccacagag
gacaaagttcacatatgcagaaatttcaactctgatggctactcctacccacctcggcaa
attgtcagtcttgaagatgagatatga
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