Colossoma macropomum (tambaqui): 118822688
Help
Entry
118822688 CDS
T09004
Symbol
ddx58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04622
RIG-I-like receptor signaling pathway
cmao04623
Cytosolic DNA-sensing pathway
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118822688 (ddx58)
04623 Cytosolic DNA-sensing pathway
118822688 (ddx58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118822688 (ddx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmao04054
]
118822688 (ddx58)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118822688 (ddx58)
Pattern recognition receptors [BR:
cmao04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118822688 (ddx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
CARD
SWI2_SNF2
GTP_cyclohydroI
SNF2-rel_dom
PhoH
AAA_22
IstB_IS21
AAA_19
ATP-synt_ab
HNH_5
AAA_23
Motif
Other DBs
NCBI-GeneID:
118822688
NCBI-ProteinID:
XP_036447793
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MYELEKENLRCFSRYIIQILRPSYIRVFMTTYLDEESVERILSEEKSSVTSAAQMLLERM
WQLEEAGWFQAFLDTLHTSEYTGLYAAVSKWDFKELDDMQPFKRLLDRIEPSITKNMKPR
ELLTHMSDCITQRECEEIRAVEDQSGCVAASERLVDSLRRSDKPWFKVLKMALEACSQKL
ALQLLEPSTDESEKCVSEDEENMDTMTTVRFEYREEGESDCGLLKSINEINHTDWLNEGA
GVMAGVIERAAERKLREYQKELATAAFSGQNTIICAPTGCGKTIVALAICEHHLKKFPGK
AKVVFMATKVEVYEQQYKLFIEHFSKDPDVRVTGVCGEMEVCMRTVVESNDVVVLTPQCL
VNALQAGELESLQVFSLLLLDECHNTTGKHPYNNIMNRYLDIKLTGSTHTLPQIVGLTAS
VGIGSFKNQQEAEINICQLCANLDARVIATVTTNIDELRSYVHIPEKDFFEVPPRTSDPF
IRIISNIMSNIEELAKKVYNIETLSPIVNRDYGSQKYEQWIVAVQKGCKLLQLDDPEQER
RVCRALFNYTEHLRKYNDALIINEDARTKDALDYLQAFIEQVRNAGYDDTERKLTAFFDA
QRDQFQRLATEGQENPKLQELKFILEEEYRNNDQTRTVLFVRTRALADALKKWIDESESL
KFLKPGVLIGRGRRSSQLVGSGMTLTSQKGVLDSFKSSDQSKILIATSVADEGIDIPQCN
LVLMYEYVGNVVKMVQVRGRGRAAGSRCFLISSRKERIEKERQNMQREKIVEKAIASLQT
SPEKLQAKVNLFQKTDKIKRDYMSLSPEKPRTVGSYKLLCAKCEKFACFSHDLRVLKECH
HVVLDRSVFQRCATEPHQNPKSFGGITKTQKMYCADCKHDWGIIASYLSIRDLPILKIES
FVVQNVVTLQKQWYRKWRDVTFAMQEFDLTEITPETWGLRE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaactggagaaagaaaacctgcggtgctttagtcgctacatcatccagatttta
cggccgtcctacatcagagttttcatgactacatatctggacgaagagtctgtagagagg
atcctgtcagaggagaagtcgtcagtgacatcggcagctcagatgctgctggagaggatg
tggcagctggaggaggccggctggtttcaggcctttctggacactctgcacacctcggaa
tatacaggactgtatgcagcggtcagcaagtgggatttcaaggagctggatgatatgcag
cctttcaagaggctgttggatcgcattgagccatccatcaccaaaaacatgaagcccaga
gagctgctgacacacatgagcgactgcatcactcagagagagtgtgaagagatcagagcg
gtggaggatcagtctgggtgtgttgcagcgagtgagcggctggtggacagtctgagacgt
tctgataaaccatggtttaaagtgctgaagatggccctcgaggcctgcagccagaaactc
gccctacagctcctggagcccagtacagatgagagcgagaaatgtgtgtcagaggatgaa
gagaacatggacaccatgactacagtgcgttttgagtatagagaggagggagaaagcgat
tgtggtctcttgaagagcatcaatgagatcaatcatactgactggctcaatgagggtgca
ggggtcatggccggtgtgattgagagggcagcagagaggaagctgagagagtatcagaaa
gagctggccaccgccgcctttagtggacaaaacaccatcatctgtgctcctaccggttgt
gggaaaaccatcgttgccttggcgatctgtgagcatcacctgaagaagtttcctgggaag
gcaaaggtcgtgttcatggcaaccaaggtggaggtttacgagcagcagtacaaactcttc
atcgagcatttcagcaaagacccggacgtcagggtgacgggtgtgtgtggtgaaatggag
gtgtgtatgcggacagtggtggagagtaacgacgtggtggtgttgacccctcagtgcctg
gtgaacgctctgcaggctggagagctggagtctctgcaggtcttcagtctgctgctgctg
gacgagtgtcacaacactacaggaaaacacccctacaacaacatcatgaaccgctacctc
gacatcaaactcaccggcagcacacacacactgcctcagattgtaggcttaacagcgtct
gtaggtatcggtagttttaagaaccagcaggaggcggagataaacatctgccagctgtgt
gccaacctggatgccagggtcatcgccacggttaccacgaatatagatgagctgaggtca
tacgtacacatacctgagaaagacttttttgaggtacccccccgcacctcggaccctttc
atcagaatcatcagtaacatcatgagtaacattgaagagctggccaagaaagtctacaac
attgagactctctcgcccattgtgaaccgtgattacggcagtcagaagtacgaacagtgg
atcgtggctgtgcagaagggctgtaagctgctgcagctggacgaccctgagcaggagagg
agagtctgcagggctttattcaactacaccgaacacctgcgcaaatataacgacgctctg
atcattaatgaggacgccaggaccaaagacgctctggactacctgcaggccttcatcgag
caggtccgcaacgctggctacgacgacacggagagaaaactcaccgcgttcttcgatgct
cagagggatcagtttcagcgtttggccaccgaggggcaggagaaccccaaactgcaggag
ctgaagttcatcctggaggaggaatatcgcaacaacgatcagacccgcaccgtgctgttc
gtcaggacccgagccctcgcagacgctctgaaaaagtggatagacgagtcagagtctctg
aagtttttaaagcctggagttttgattggaagaggtagaagatcgtctcagctggtgggc
tcaggaatgaccctgaccagtcagaaaggcgttttagactcctttaaaagttctgaccag
agtaagatcctcatcgccacatctgtcgctgatgagggcatagacatcccacagtgcaac
ctggtgctgatgtacgaatacgtgggcaacgtcgtaaagatggtgcaagttcgaggtcgt
ggcagggccgcgggcagtagatgctttctgatctccagcagaaaggagcgtattgaaaag
gagaggcagaacatgcagagagagaaaatcgtagagaaagccatcgccagcctgcagacc
tccccggaaaagctccaggccaaggtgaatttgttccagaagactgataaaatcaagaga
gattatatgagcctgagtccagagaagcctcggaccgtgggcagttataagctgctgtgt
gcgaagtgtgagaagtttgcctgtttcagccacgacctgcgagtgctgaaggagtgccac
cacgttgtcctggaccgctccgtatttcagcgctgtgccactgagccccatcagaacccc
aagagctttggaggaatcactaaaacccagaagatgtactgcgcagactgtaaacacgac
tggggcatcatcgcttcatatctcagcataagggatctaccgattctcaaaatcgagagt
tttgtggtccagaacgtcgtcacactgcaaaagcagtggtacaggaagtggcgtgatgtg
accttcgccatgcaggagttcgacctgacagaaatcactccggagacgtgggggctgagg
gagtag
DBGET
integrated database retrieval system
