Colossoma macropomum (tambaqui): 118823447
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Entry
118823447 CDS
T09004
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04115
p53 signaling pathway
cmao04145
Phagosome
cmao04148
Efferocytosis
cmao04350
TGF-beta signaling pathway
cmao04510
Focal adhesion
cmao04512
ECM-receptor interaction
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118823447
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118823447
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118823447
04148 Efferocytosis
118823447
09143 Cell growth and death
04115 p53 signaling pathway
118823447
09144 Cellular community - eukaryotes
04510 Focal adhesion
118823447
09142 Cell motility
04820 Cytoskeleton in muscle cells
118823447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118823447
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmao00536
]
118823447
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Phagocytosis
Opsonins
118823447
Glycosaminoglycan binding proteins [BR:
cmao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118823447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_ADAMTS
TSP1_CFP_C
EGF_3
Laminin_G_3
cEGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
118823447
NCBI-ProteinID:
XP_036448964
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MMFTALFLLVMLWTSEGGRVAENRDDNSMYDLFELARINKRHHGVSLVKGPDPYSPAYKI
LNPNLIPSIPEHSFRDLIYSIQAEKGFFLMVNLKQAKKTRGSLLTVEKKDGSGPIFEIIS
NGDAHTLDLVYTTANRQHVVSIEDAQLASGSWKNITLFVQDDRAQLYVGCEEINTSELDV
PIHQILTQEVVDIATLRIGKGAVKDRFMGVLQNVRFVFRTTLDTILRNMGCESSTFITDV
MTLDNPVNGTSPAIRTDYTGHKTKDLQDICGFSCEDLASMFKELKGLGVVVKQLSNELRQ
VTADNNLIKNQISIHSGVCLHNGIVYKDKDEWTVDSCTHCTCQNSATICREISCPLMPCA
NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTSV
QTRDCYLQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCQGEG
RQTEPCKMSPCPVNGGWGPWSPWDTCSVTCGGGLQTRNRLCNNPVPKYGGKECVGDFKGT
RLCNSQDCPIDGCLSNPCFAGSKCTSFPDGSWKCGQCPVGYTGDGIHCEDIDECKDVPDA
CFTINGVHRCENTEPGYNCLPCPPRYSGRQPFGKGIEQAMANKQVCVPRNPCEDGSHECN
KKANCIYLGVFSDIMYRCECKPGYAGNGYICGEDTDLDGWPNTDLHCVENATYHCKKDNC
PDLPNXGQEDYDKDGIGDACDYDDDNDGIPDDRDNCPFVFNPRQYDQDHDEVGDRCDNCP
YDSNPDQIDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNVDQRDTDYDGVGDHCDNCPL
EHNPDQIDSDSDNVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGVPDERDNCRLAFNPDQIDSDGDGRGDVCKDDFDQDNVPDIEDVCPENFAISETDFR
RFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGYIRVIMYEGKKVMADSGSI
NDKTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaccgcactctttttactggtgatgctctggacttcagaaggtggccgagtg
gcagagaacagagatgacaacagtatgtatgaccttttcgagcttgcacgcatcaataag
aggcaccatggagtgagtttggtgaagggtccggatccttacagccccgcttacaaaatt
cttaaccccaacctgatcccctcgatcccagagcactccttcagggacctcatttattcc
atccaggcagaaaagggattcttcctcatggtcaacctgaagcaagccaaaaagaccaga
ggcagcctgttgaccgtggagaagaaagacggctctgggcccatttttgagattatctcc
aatggagatgcccacactctggatttggtttacacaacagctaacagacaacatgtggtc
tcaattgaagatgcccaattggcaagcggcagctggaagaatatcaccttgttcgtgcag
gacgaccgtgcacaactgtatgttggttgcgaagagataaatactagtgagctggatgtg
cctatccaccaaattctgacacaggaggttgtcgatattgctaccctgcggataggaaaa
ggagcagtgaaagacaggtttatgggagtcctccagaatgtgcgctttgtctttagaacc
actttggacacaatcctacggaacatgggatgcgagagctccaccttcatcacagacgtc
atgaccctagacaaccctgtgaacggcaccagtccggctatccgcacagattacactgga
cacaagaccaaagatctccaagacatctgtggcttctcttgtgaggacctggccagcatg
tttaaggagctcaaggggcttggtgtggtggttaagcagctgtcaaacgagctccgccaa
gtgactgcagataacaacttaataaagaaccagatttcgatccacagtggggtgtgcctg
cacaatggcattgtctacaaagacaaggacgagtggacggtggacagctgcacccactgc
acctgccagaactctgccaccatttgtcgggaaatctcctgcccgctcatgccttgtgcc
aatgccaccgtgcctgatggtgaatgctgcccgcgctgtggaactccgagtgactatgct
gaagatggctggtcgccctggtctgagtggacccactgctcagtgacctgtggccgtggc
atccagcagcgtgggcgctcctgtgaccgcatcaatagcaactgcgatggcacctcagta
caaaccagagactgctacctgcaagaatgcgacaaacgcttcaagcaagatggaggctgg
agccactggtctccctggtcctcatgctcggtgacctgtggagaaggcgtcatcacacgc
atccgcctgtgcaactcacctactccacaaatgggtggcaaggactgccaaggagagggc
cgacagactgaaccatgcaagatgtctccatgcccagtcaatggaggctgggggccatgg
tcaccatgggacacttgctctgtcacgtgtggtggaggactgcagaccaggaatcgtctc
tgtaacaatcctgtgcccaaatatggtggaaaagaatgtgtgggtgattttaaaggcacc
cgtttgtgtaactcccaggactgtcccattgatggctgtctttccaacccttgctttgct
ggcagtaagtgcaccagcttccctgatggctcctggaaatgtggacagtgcccagttggc
tatactggagatggaatccactgtgaggacattgatgagtgcaaagatgttcctgatgcc
tgtttcacaattaatggagtccatcgctgtgagaacacagagccgggctataactgcctt
ccctgcccccctcgctactctggacgtcagccttttggaaagggtattgaacaagctatg
gccaacaaacaggtctgtgtgccaaggaacccttgtgaggatggaagccatgagtgtaac
aaaaaggccaactgtatttacttgggagtgttctcagacatcatgtaccggtgtgagtgc
aaacctggttatgctggaaacggctacatctgtggagaggacactgatctggacggctgg
cccaacactgacctccactgcgtggagaatgccacctaccactgcaagaaggacaactgc
cctgaccttcccaacntcggccaagaagactacgacaaagatggaatcggagacgcttgt
gattacgatgatgacaacgatgggatccctgatgatagggacaactgcccgttcgtcttc
aacccaagacagtatgaccaagaccatgatgaagtcggtgatcgctgtgataactgccca
tacgacagcaaccctgaccagattgacactgacaacaatggagaaggcgatgcttgtgcc
attgacattgatggtgatggtattctgaatgagaaggacaactgcccatacgtgtacaat
gttgaccagagagacactgactacgatggggttggagaccattgtgataactgcccattg
gagcacaaccctgatcagattgactctgattccgataatgtgggcgacaagtgcgacagc
aaccaggacattgacgaggatggccatcagaataatctggacaactgcccatacatcccc
aatgccaaccaggctgaccatgacaaggacggaaaaggggatgcatgtgaccacgatgat
gacaatgatggtgtgcctgatgagagagacaactgcagactggccttcaacccagaccag
attgactctgatggtgatggacgtggtgatgtttgcaaagatgactttgaccaagacaat
gtgcctgatattgaagacgtttgtccagagaactttgccatcagcgagacagacttccgt
aggttccagatggttcctctcgaccccacaggaacgtcacaaattgaccccaactgggtg
gtccgccatcagggaaaagagcttcttcagacagtcaactgcgaccctggtattgctgtt
ggttatgatgagttcaatgcggtggacttcagcggaaccttcttcatcaatactgaccga
gatgacgattatgccggttttgtgttcggctatcagtccagttcccgcttctatgtggtg
atgtggaaacagatcacgcagacatactggtctcacacgccaacaagagctcagggctat
tctggactgtccatcaaagtggttaattcaaccacagggccaggcgagcatctcaggaat
gctttgtggcatactggagatacaccaggacaggtgcgtactttgtggcatgaccccaag
aacattggctggaaagattacactgcctacagatggcacctgatccacagacctaaaact
ggatacatcagagttatcatgtacgagggcaagaaagtcatggcagattctggaagcatt
aatgacaagacatatgctggtggaagacttggtctctttgtcttctctcaagagatggtt
tacttctcagatctcaaatatgaatgcagagatgtataa
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