KEGG   Colossoma macropomum (tambaqui): 118823644
Entry
118823644         CDS       T09004                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118823644 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmao03041]
    118823644 (smndc1)
Spliceosome [BR:cmao03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118823644 (smndc1)
 Complex B
    118823644 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    118823644 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 SspH LMBR1
Other DBs
NCBI-GeneID: 118823644
NCBI-ProteinID: XP_036449262
LinkDB
Position
Unknown
AA seq 237 aa
MSEDLVKQLNSYRAQLQQVEAALSTDPDNEDLLKLQKDLQEVIELTKDLLTSQPAEGVAD
ANSSDAAPPKSSWNVGDRCMAMWSQDGQPYEAEIEEIDGENGTAAVTFLGYGNAEVVPLH
TLRPAEQGKTSKEEAAKPKSKKKLLAEQREYKKKKAQKKVQRLKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggaggatttggtgaaacagttgaacagttacagagctcagctccagcaggttgag
gcggctctctccaccgaccccgacaatgaggacctgctcaaactgcaaaaggacctgcag
gaggtgatcgagctcactaaagacctgttgacatctcagccagcggagggcgtcgctgat
gctaacagctccgatgcagctccacctaaaagcagctggaatgttggagatcgctgtatg
gccatgtggagccaggatggacagccgtatgaggcagagattgaggagattgacggagaa
aacggaacggctgctgtgacgtttctcggatacggaaacgctgaggtggttcctctgcac
acgctccggccagccgaacagggcaagaccagcaaagaggaagcagccaaacccaagtca
aagaagaagctgctggcggagcagagagagtacaagaagaagaaagctcagaagaaagtt
cagcgtctgaaggagttggagcaggagagagaagaccagaaatctaaatggcagcaattc
aacaataaagcttactccaaaaacaaaaaaggacaggtaaagcgcagtatatttgcatct
ccggagagtgtgaacggtaaagtcggagtggggacgtgtgggatagcagataagccgatg
actcagtaccacgacacctccaaatacaacgtcaggcacctcatgccccagtga

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