Colossoma macropomum (tambaqui): 118827146
Help
Entry
118827146 CDS
T09004
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
cmao04137
Mitophagy - animal
cmao04141
Protein processing in endoplasmic reticulum
cmao04210
Apoptosis
cmao04217
Necroptosis
cmao04621
NOD-like receptor signaling pathway
cmao04622
RIG-I-like receptor signaling pathway
cmao04920
Adipocytokine signaling pathway
cmao05132
Salmonella infection
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118827146 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118827146 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118827146 (traf2a)
09143 Cell growth and death
04210 Apoptosis
118827146 (traf2a)
04217 Necroptosis
118827146 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118827146 (traf2a)
04622 RIG-I-like receptor signaling pathway
118827146 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118827146 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118827146 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
118827146 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118827146 (traf2a)
04121 Ubiquitin system [BR:
cmao04121
]
118827146 (traf2a)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118827146 (traf2a)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118827146 (traf2a)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118827146 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
zf-ACC
zf-RING_6
zf-RING_UBOX
MATH
ATG16
Motif
Other DBs
NCBI-GeneID:
118827146
NCBI-ProteinID:
XP_036454267
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MLKYISPFFFFTERDELTFISLLAVARSHARSGIMAAQEPSPPSSLEGNKPGFPRKILAN
KLEDKHLCNICQKILRRPFQAQCGHRFCSYCFNKTVSSGPQKCSACIKEDIFEEPTSILK
QGCAFPDNAAKREVEALEAVCINEGCSWTGTIKEYEATHEGQCDFMIIPCPSCKELLRAN
ELERHNERECPERTLNCKYCKEPFHFKNIKAHDEICPKYPMICEGCAKKKIPREKYVDHI
KLCTKFRTPCRFHVVGCDMSVEKEKIHDHERACSYEHLNLLLHFIMGIKVNLESLQPQSL
ELASHKIQELHQSLRELELKMGQLSAGAPVQGACAPPPLPPPTLATSFTPLPTAVGAALE
LQLHSEKTKVAELSRRCQELELKVGTFENIVCVLNREMERSATTMEAYNRQHRLDQDKID
ILNNKVRQLERTVSLRDISIVEMEGKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPA
MFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLL
DQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAI
VDLTGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatatataagccccttttttttctttaccgaaagagacgagctcactttcatt
tctctcctcgccgtagccaggtcacatgctcgctcgggaataatggctgcacaggaaccg
tccccaccatcttcactagaaggcaacaaacctggcttcccgaggaaaattctcgccaac
aagcttgaggacaagcatttgtgcaacatctgtcagaaaatcctcaggaggccgtttcaa
gcgcaatgcggacaccgtttctgttcatattgttttaacaaaacagtgagctccggtcca
cagaaatgcagtgcctgtataaaggaagatatatttgaggagcctacatctattctgaaa
caaggctgtgcttttcctgacaatgctgccaaaagagaagttgaagcccttgaagctgtg
tgtatcaatgaaggatgcagttggacaggcactatcaaagaatacgaggccacacatgag
ggacagtgtgatttcatgatcattccttgtccctcctgcaaagagcttttaagggccaat
gagctcgagcgtcacaatgagagagaatgccctgagaggaccctgaactgcaaatactgc
aaagaaccctttcatttcaaaaacattaaggctcacgatgagatttgtcccaaataccca
atgatttgtgaaggctgtgcaaagaagaaaattcccagagagaagtacgtggaccacatt
aagctgtgtaccaaatttcgaactccctgcagatttcatgttgtcggctgtgacatgtcc
gtggagaaggagaagatccacgaccatgagcgggcatgttcctatgagcacctgaacctc
ttgctgcacttcatcatgggcatcaaggtgaacctggagagtctgcagccccagagcctg
gagctggccagccacaagatccaggagctgcaccagtctctgcgcgagctcgagctgaag
atgggccagctgagtgcgggtgctcccgtgcagggggcctgtgcacctcccccacttccg
ccaccaaccctggccacctccttcacccctctgcccactgcggtcggagctgccctggag
ctgcagctccacagcgagaagaccaaggtggcagaactcagtcgtcgctgccaggagttg
gagctgaaagtgggcaccttcgagaacatcgtctgcgtgctgaatcgtgagatggagcgc
tccgccaccaccatggaggcctacaatcgccagcacaggcttgaccaggacaagattgac
atactcaacaacaaggttcgtcagctggagaggacggtgagtctgagggatatctccatc
gtggagatggaggggaagatgagagaaatgtctgctgccacatacgacggcgtttttgtg
tggaagatctcggacttctcgaagaagaggcaggatgctgtagccggacgggccccggcc
atgttctctcctgcgttttacacaagcaaatatggctacaagatgtgtttgcgtatctac
ctgaacggggatggaacggggcgtggcactcacttgtctctgttcttcgtggtgatgagg
ggacacagtgatgccttgctcaagtggccttttaaccagaaggtcactcttatgctgctg
gaccagaacaacagagaacacatcattgacgccttccggcccgacatctcctcctcctcc
ttccagagacccgtcagcgacatgaacatcgccagtggctgcccgctcttctgcccgctc
tccaaactggactccaagaactcctacatccgggacgacaccatcttcatcaaggccatc
gtcgacctcaccggcctttag
DBGET
integrated database retrieval system
