Clavibacter nebraskensis: CMN_01068
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Entry
CMN_01068 CDS
T02530
Name
(GenBank) putative efflux MFS permease
KO
K08167
MFS transporter, DHA2 family, multidrug resistance protein
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmc02000
]
CMN_01068
01504 Antimicrobial resistance genes [BR:
cmc01504
]
CMN_01068
Transporters [BR:
cmc02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
CMN_01068
Antimicrobial resistance genes [BR:
cmc01504
]
Gene variants
Quinolone resistance genes
Transporter
CMN_01068
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump QacA [MD:
M00714
]
CMN_01068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
Motif
Other DBs
NCBI-ProteinID:
CCE75023
UniProt:
A0AAI8ZHF6
LinkDB
All DBs
Position
1101900..1103441
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AA seq
513 aa
AA seq
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MSTPRTASVAVTAATGRAGRRQWAALVVLMLPVLLVSIDNTVLSFAMPSIARDLEPSGAA
QLWVIDAYPLVLAGLLVAMGNMGDRYGRRRLLMIGTAGFGLVSALAAFATDASQLIVARA
ALGFFGAMLMPSTLSLLRSIFTDREQRRLAIAIWASGFSGGSALGPLVGGVLLEHFWWGS
VFLVAVPVMLPLLILTPVLVPESKDPAPGPIDGIAILLSLATVAPLVYAIKTFATEGVTP
LAIAAPVVGVVAGILFVRRMSRARNPMLDVALFREPVFTGAVLVNLLSVVSLVGFLFFVT
QHLQLVAGLDPLAAGFALIPGSVVVIVSGLVIVPIVARARPSRVVAIALALSAAAYVILA
ATGRDASVGLLVFAFCLLGAGIGASQTISNDLIIAAVPPAKAGAASAVSETAYEVGAVLG
TAVLGSILTASYRTGLALPAGLSEGDASAARETLGGAVSVAERVPAHVGAALLESAHRAF
DGGVVTTSIIGALLMVGAIVISLTSLRRASSHD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccccgcaccgcatccgtcgccgtgaccgccgccaccggccgcgccgggcga
cgccagtgggcggcgctcgtggtgctgatgctgcctgtgctcctcgtctccatcgacaac
acggtgctgagcttcgcgatgccgtccatcgcgcgcgatctcgagccgtcgggtgccgct
cagctctgggtcatcgacgcgtacccgctcgtgctcgccgggctcctcgtcgccatgggc
aacatgggcgaccgctacggccgccgccgcctcctcatgatcggcacggccggcttcggc
ctcgtctccgccctcgccgcgttcgcgaccgatgcctcgcagctcatcgtcgcgcgcgcc
gcgctcggcttcttcggcgcgatgctcatgccctctacgctctcgctcctgcgctcgatc
ttcaccgaccgggagcagcgccgcctcgccatcgcgatctgggcgtcaggcttctccggc
ggatccgcgctcggcccgctcgtgggcggcgtgctgctcgagcacttctggtggggctcc
gtgttcctcgtggccgtgcccgtgatgctgccgctgctcatcctcacgcccgtgctcgtg
ccggagtcgaaggacccggcgccggggccgatcgacgggatcgcgatcctgctgtcgctg
gcgaccgtcgcgcccctcgtctacgccatcaagacgttcgcgaccgagggcgtcacgccg
ctcgcgatcgccgcgcccgtcgtgggcgtggtcgccggcatcctcttcgtgcgccgcatg
tcccgcgcgcggaaccccatgctcgacgtcgcgctcttccgcgagccggtcttcacgggc
gcggtgctcgtcaacctgctgagcgtcgtctcgctcgtcggcttcctcttcttcgtgacg
cagcacctgcagctggtcgcgggcctcgacccgctggccgccgggttcgcgctcatcccg
ggatccgtggtcgtcatcgtctccgggctcgtgatcgtgccgatcgtggcgcgcgcccgc
ccgtcgcgcgtcgtcgcgatcgcgctggcgctctcggcggccgcctacgtgatcctcgcg
gccacgggccgggacgcgtccgtcggcctgctggtgttcgccttctgcctgctgggtgcg
ggcatcggcgcgtcgcagaccatctcgaacgacctgatcatcgcggccgtcccgccggcg
aaggcgggtgcggcctccgcggtgtcggagacggcgtacgaggtgggcgcggtgctcggc
acggccgtgctcggcagcatcctcacggccagctaccgcacgggcctcgcactgccggcc
ggcctctccgagggcgacgcgtccgcggcgcgggagacgctcgggggagcggtctcggtc
gccgagcgcgtgccggcccacgtcggggcggcgctgctcgagtcggcgcaccgggcgttc
gacggcggcgtggtgacgacgtcgatcatcggcgccctgctcatggtcggcgcgatcgtc
atctcgctcacgagcctgcgtcgcgccagctcgcacgactga
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