Clavibacter nebraskensis: CMN_02441
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Entry
CMN_02441 CDS
T02530
Symbol
ispDF
Name
(GenBank) bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00900
Terpenoid backbone biosynthesis
cmc01100
Metabolic pathways
cmc01110
Biosynthesis of secondary metabolites
Module
cmc_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CMN_02441 (ispDF)
Enzymes [BR:
cmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CMN_02441 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
CMN_02441 (ispDF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IspD
YgbB
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
CCE76376
LinkDB
All DBs
Position
complement(2579231..2580463)
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AA seq
410 aa
AA seq
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MSHDPVVPSTPAIADGATDGPRLGVAVVAAGSGTRLGAGIPKALVEVGGATLLARSLGAV
LGLAEEAHVVVVAPETHLAETTAVVGAVAGAARGSVAVVVGGATRQGSVRAGLAALAGSV
DTVLVHDAARALTPTALFAAVAQAVRAEGAGVVPGLPVTDTVKRVDPAGECLGTVDRSDL
VGVQTPQGFPRAALDAAYARAAAEHTDDAALFQASGGRVRVIPGDALAFKVTTAWDLRRA
EELVARDAGTGSAPSRLRSGIGTDVHAVDATQPLWLAGLHWPGEAGLAGHSDGDAVSHAM
CDALLSAAGLGDIGGIFGTDDPELDGAHGEVFLRRTAELVRGAGYRVVNVAVQVMAVRPK
LSPRRVEAERILSAAVGAPVSLAGTTTDGLGFTGRGDGVAAVATALVERL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaccccgtcgtcccgtccaccccggcgatcgcggacggcgcgacggacggg
ccccggctgggcgtcgccgtcgtggccgcgggcagcggcacgcggctcggggcggggatc
ccgaaggcgctcgtcgaggtcggcggcgccacgctgctggcccgctccctgggcgcggtc
ctcggcctcgcggaggaggcgcacgtcgtcgtcgtcgcacccgagacgcacctggccgag
acgacggccgtcgtgggcgccgtcgccggcgcggcgcgcggatccgtcgcggtggtggtc
ggcggcgcgacccggcaggggtccgtgcgggcgggcctcgccgcgctcgccggatccgtc
gacacggtcctcgtgcacgacgccgcccgcgcgctcacgcccaccgcgctcttcgccgcc
gtggcgcaggccgtccgggccgagggcgccggcgtggtcccgggcctccccgtcaccgac
accgtcaagcgcgtggatcccgcgggggagtgcctcggcaccgtcgaccgcagcgacctg
gtcggggtccagaccccgcagggcttcccgcgggccgcgctcgacgccgcctacgcgcgg
gccgccgccgagcacacggacgacgcggccctgttccaggcgtcgggcggccgcgtccgc
gtgatccccggcgacgcgctcgccttcaaggtcaccaccgcgtgggacctccggcgcgcg
gaggagctcgtcgcccgggacgcgggcacgggatccgccccctcccgcctccgctccggc
atcggcacggacgtgcacgcggtcgacgccacccagccgctctggctcgcgggcctgcac
tggccgggcgaggcgggtctcgcgggccacagcgacggcgacgccgtcagccacgccatg
tgcgacgcgctgctgtcggccgcgggcctcggcgacatcggcgggatcttcggcaccgac
gacccggagctcgacggcgcgcacggcgaggtcttcctccggcgcaccgcggagctcgtg
cgcggtgccggctaccgggtcgtgaacgtcgccgtgcaggtcatggccgtgcgccccaag
ctgtcgccgcggcgggtcgaggccgagcggatcctctcggccgccgtcggcgcgcccgtc
tcgctcgcgggcaccaccaccgacgggctcggcttcacggggcgcggcgacggcgtcgcg
gcggtcgcgacggccctcgtcgagcgcctctga
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