Cyanidioschyzon merolae: CYME_CMP335C
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Entry
CYME_CMP335C CDS
T00175
Name
(RefSeq) box C/D snoRNP and U4 snRNP component Snu13p
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
cme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CYME_CMP335C
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CYME_CMP335C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cme03041
]
CYME_CMP335C
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMP335C
Spliceosome [BR:
cme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CYME_CMP335C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CYME_CMP335C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Ski2_N
HTH_29
Motif
Other DBs
NCBI-GeneID:
16995952
NCBI-ProteinID:
XP_005537958
UniProt:
M1VFX0
Structure
PDB
PDBj
LinkDB
All DBs
Position
16:complement(838548..838985)
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AA seq
145 aa
AA seq
DB search
MEPLSSTEAPSRPMDVVTAPNQADPRAYPFAPADLVVEILDLVQQASHYKQIKKGLNEVL
KSMNRGLAEFVVLAADTQPLEILLSAPLVAEDKAVPYVFVPSKAALGRACGVSRPVIACA
VLRADMSQLRNQITALRTKIEQLLL
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggaacctttgagctccactgaagcgccaagcaggcccatggacgtcgtcaccgcgccg
aatcaggcggatccgagagcgtacccgttcgctcctgctgacttagtcgttgaaatactc
gatcttgtccagcaagcgagccattataagcagatcaaaaagggtctgaacgaggtgctc
aagtcgatgaatcgcggtctggcagagtttgttgttctcgcggctgatacgcaacctttg
gagatactgctctcagcgccgctcgttgcagaggataaagcggtaccgtatgtattcgtt
ccctcgaaagccgcgctgggacgtgcatgcggcgtttcccgtccagtgatcgcctgtgcg
gttctacgggcggatatgagtcaactgcggaaccagatcaccgcgcttcgaacaaagatc
gaacagcttctgctctga
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