KEGG   Cyanidioschyzon merolae: CYME_CMQ353C
Entry
CYME_CMQ353C      CDS       T00175                                 
Name
(RefSeq) ring-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03420  Nucleotide excision repair
cme04120  Ubiquitin mediated proteolysis
cme04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CYME_CMQ353C
   04120 Ubiquitin mediated proteolysis
    CYME_CMQ353C
  09124 Replication and repair
   03420 Nucleotide excision repair
    CYME_CMQ353C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cme04121]
    CYME_CMQ353C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMQ353C
Enzymes [BR:cme01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     CYME_CMQ353C
Ubiquitin system [BR:cme04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   CYME_CMQ353C
  Multi subunit type E3
   SCF complex
    Ring finger protein
     CYME_CMQ353C
   Cul2 complex
     CYME_CMQ353C
   Cul3 complex
     CYME_CMQ353C
   Cul4 complex
     CYME_CMQ353C
   Cul7 complex
     CYME_CMQ353C
   Cul8 complex
     CYME_CMQ353C
   Cul9 complex
     CYME_CMQ353C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CYME_CMQ353C
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CYME_CMQ353C
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 PHD_NSD ASTN_1_2_N zf-RING_16 zf_RING_Vps8_fungal zf-RING_UBOX
Other DBs
NCBI-GeneID: 16996314
NCBI-ProteinID: XP_005538245
UniProt: M1VAP2
LinkDB
Position
17:918920..919273
AA seq 117 aa
MSAIEGASKGAIPVEGERAVESGSQYPKKRFEVKQWNAVAAWSWDLRVDNCAICRNHIMD
LCLECQADPQNARASECVVTWGICNHAFHSHCINKWLETRNVCPLDNRPWHKLKEGR
NT seq 354 nt   +upstreamnt  +downstreamnt
atgagtgccatcgaaggtgcttccaagggcgctatccccgtcgagggagagcgtgctgta
gagtcggggtctcagtatccgaagaagcgattcgaagtgaaacagtggaacgctgtggcg
gcgtggagttgggacctacgcgtggataactgcgccatctgtcgcaatcatatcatggac
ctttgtttggagtgccaggctgatccccagaacgcacgcgcgagtgaatgtgttgtgacc
tggggtatctgtaaccacgctttccacagtcattgtatcaacaagtggctagagacgcgg
aacgtgtgcccgctggacaaccgaccttggcataaactgaaagaaggtcggtag

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