Cyanidioschyzon merolae: CYME_CMT280C
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Entry
CYME_CMT280C CDS
T00175
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYME_CMT280C
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cme01007
]
CYME_CMT280C
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMT280C
Enzymes [BR:
cme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CYME_CMT280C
Amino acid related enzymes [BR:
cme01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CYME_CMT280C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CYME_CMT280C
Prokaryotic type
Other AARSs
CYME_CMT280C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
BcrAD_BadFG
Motif
Other DBs
NCBI-GeneID:
16997970
NCBI-ProteinID:
XP_005539289
UniProt:
M1VMI6
LinkDB
All DBs
Position
20:703805..707428
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AA seq
1207 aa
AA seq
DB search
MEQFSCGGRLTSAQVKQIAPEAVNFPDRERLVLSFWNDSRAFERSNELAVGKPLFTFYDG
PPFATGLPHYGHLLAGTIKDTVTRYAYQTGYQVPRRFGWDCHGLPVEYEIDQKLGIRSRE
DVLKLSIAAYNEECRKIVLRYSGEWERIVSRMGRWIDFKNGYRTMDTSFMESVWWVFSQL
HKKGLVYRGFKVMPFSTACSTPLSNFETNLNYREVQDPAITISFPVLNDPDHASFLAWTT
TPWTVPSNVALCVHPELIYVRVRDHSREDRVWILAEARLGSIFKMNDARKHSSACEFTII
ARHHGYELVGLHYEPVFDYYKDSRFRELLRDPFRVLGDDFVTADSGTGVVHLSPAFGEDD
YRVCMREGVIGCAGGRPDRPVWLPCPVDEDGKFTEPVDDFRGMYIKEADRGLIRKMKTLS
RLVKHETYTHSYPFCWRSDTPLIYRAVPSWFIAVEKFRDRLLDCNARTYWVPEVIREHRF
ANWLENTRDWNVSRNRYWGTPLPVWTDRTGDEIIVVGSIAELEELAGLPTGSISDLHRHN
IDSIEIRSRQNPGNVLRRVEEVFDCWFESGAMPYASVHYPFEHEEDFFQKGMFPAQFIAE
GLDQTRGWFYTLMVLGTALFNEPPFKNVIVNGLVLAEDGKKMSKRLKNYPDPMDMIENFG
ADALRLYLINSPVVRGEPLRFKETGVKDIVRDVMLPWYNAFRFFIQNFAAFAEANAEADT
LLRQAKGTTERSNPMDRWILSLLASLISFLHKEMRAYRLYTVVPRLLLFIESLTNWYVRL
NRPRLKGSGARSALDQAVALCTLGDLLSRLAVLMAPFAPFMAEWTYQTLRSLPLVSLYEQ
TADSVHFLPLPSSDEEAVDLVFEEKVRHMQLAITLGRAIRERRNVALKQPLHTLTVIHHN
EQTLQNVASLEEYVRGELNVKQVVYSTDEDRYISRRAIPDGKLLGRRLGSAFKEATAEIR
SWTPMQVAKVERERSATVCQGRYQISVDEIFINRDVNREALREGEDVECDVLNGMIVILN
LGIDHELFLDGIAREIVNRVQKLRKKLGLVPSDRVDVFIEGGSVVEQALNSRADLVGSML
GCKRLLCTEDLSLLRKRFIPQIPLIAQEHVEPLQGDHVCISLVRAGLWLLPSAFTKRPAT
FLHALQSFLLGIRERFAAANENPNILRVVLDGERLELHEHIHFSRYAADIVADLKATAQH
TASMEAR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttttcttgcggcgggagactaacttcggcgcaagtgaagcagatcgcaccg
gaggccgttaactttcccgatcgcgagaggcttgtgctctcgttttggaacgattcgaga
gcgtttgagcgctcaaacgagttagctgtcgggaaaccgctcttcacgttttacgacggc
ccgccatttgccacgggcctgccacactacgggcatcttcttgccgggactattaaagat
acagtgacgcgctatgcttaccaaaccggataccaggttccccggcgattcggttgggat
tgtcacggccttccagtcgagtacgaaatcgatcagaaacttggcattcgctcacgggaa
gatgttttgaaactcagtatcgcagcttataacgaagaatgccgaaaaatcgttctacga
tactcgggagaatgggagaggatcgtttccagaatgggacggtggattgactttaaaaac
ggataccgcaccatggacacatcgttcatggaatcggtatggtgggtgttcagccagctt
cacaaaaagggactagtgtatcgcggcttcaaagtcatgccgttttcaacagcatgcagc
acgcctttgagtaattttgagacgaacttgaactatcgggaagttcaggatcccgcgatc
acgatttcttttcctgtgttgaatgatcctgatcacgcctcgtttctggcatggaccacc
acaccttggactgtgcctagcaatgtcgccctctgtgttcatccggaattgatatatgtg
cgcgttcgagatcattcccgtgaggaccgggtatggatcctcgcagaggcccgcctaggt
agcatcttcaaaatgaatgatgcacggaaacactcaagtgcatgcgaatttacgatcatc
gcgaggcatcacggatatgagcttgttggtttacattacgagcctgtgtttgattattac
aaggactcgcgcttccgcgagcttctccgagacccgttccgagtcttgggcgatgatttc
gtgaccgcagatagcgggactggtgtcgtgcacctctcgccagcttttggtgaagacgat
tatcgagtctgcatgagagaaggagtgatcggctgtgcaggaggaaggccggaccgacct
gtctggttaccgtgccccgtggacgaagatggcaagttcacagaacctgtggatgatttt
cgtgggatgtatatcaaagaggcagaccggggtctcatacgtaagatgaagaccctcagt
cgactcgtgaagcacgagacctacacccactcttaccctttctgctggcgcagtgatacg
ccactgatttatcgcgccgttccgtcgtggttcatagctgttgagaaattcagggatcgc
ctcttggattgcaatgcgagaacctactgggtgccggaagtgattcgggaacatcgtttc
gcgaactggcttgagaatacacgcgactggaacgtaagccggaaccgttactggggcacg
cctcttcccgtgtggacggatcgtaccggcgatgaaatcattgtcgttggatcgattgct
gagctcgaagagcttgcgggtctgcccacgggctcgataagtgatttacaccgccataac
atagactcgatcgagatacgaagccggcagaatccaggaaatgtgttacgacgagtggaa
gaagtctttgactgttggtttgagtccggcgcgatgccgtatgcaagcgttcattaccca
ttcgaacatgaagaagatttcttccagaaaggcatgttccccgcgcagttcatcgctgaa
ggtctggaccaaacacgaggatggttctatacgctcatggtgctcggaactgcgctattc
aacgaacccccgttcaagaatgtgatcgtgaatggcctcgttcttgctgaagatggaaag
aaaatgagcaaacgtctgaaaaactacccagatccgatggatatgatagagaattttgga
gctgacgccttgcgcttgtacttgatcaactcccctgtggttcgtggggagcctcttcgt
ttcaaggagactggagtcaaggacatcgttcgagacgtgatgttgccttggtataacgct
tttagatttttcatccagaactttgcagcattcgctgaagccaacgcggaagcggacacg
cttcttcgtcaggcaaaaggcacgactgagcgcagcaaccccatggatcgctggatttta
tccctcttggcctccctgatcagttttcttcacaaagaaatgcgagcctatcgcctgtac
actgtggtaccccggttactccttttcatcgagtcgctcacgaactggtatgtgcgtctg
aatcgaccgcggctgaaaggctcaggcgctcgctcagctttggatcaggccgtagcgctt
tgtacgctcggggacttgttgagcagacttgcggttcttatggcgccttttgctccattc
atggctgaatggacgtatcagacgctccgcagccttcctctggtaagcttatatgagcag
accgcagactcggtgcatttcctgcctctaccttcaagtgacgaggaagcggttgatctc
gtctttgaagaaaaagtgcgccacatgcagcttgcaatcacactgggaagagccatacga
gagcgacgcaatgtcgctctcaagcagcccttgcacacgctgacagtgattcatcacaac
gagcagaccttgcaaaatgttgcgagtcttgaggagtacgtccggggggaattgaatgtg
aaacaagttgtgtacagcacagacgaagaccgctacatctcccggagggcgatacctgat
ggcaaacttctggggcggaggcttgggtcagcattcaaggaagcaactgcggagattcga
agctggacgcctatgcaggtcgcaaaagttgagcgcgaacgctctgcaactgtgtgccag
ggccgttaccagatttcggttgatgaaatcttcattaatcgggatgtcaacagggaggcg
ctccgcgaaggcgaggacgttgaatgcgacgtcttgaatggcatgattgtcatcctgaac
ctcggtatagatcacgaactttttctggatggcattgcacgggagattgtgaaccgggtg
cagaagttacgaaagaaacttggcctcgtccctagtgatcgcgtcgatgtgtttatcgaa
ggtggttctgtcgtagagcaagcactcaatagccgggccgatttggtcggcagtatgctg
ggatgcaaaagactgctgtgcactgaggacctgtctttgttgcgcaagcggttcattccc
cagatccccttgatcgcgcaagagcatgtcgaaccccttcagggagaccatgtgtgcatt
tcgttggttcgcgctggtctatggctactcccgagtgcattcacgaagcgaccagctact
ttcctccatgccttgcagtcgtttcttcttggaattcgcgagcgcttcgccgctgcgaat
gagaaccccaatatactgcgcgtcgttctggacggcgagcgtttggagcttcacgaacac
atccatttcagtaggtacgctgcggatatcgttgctgacttgaaagccaccgcccagcac
acagcatctatggaagcacgctga
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