Corynebacterium macginleyi: GWO64_007075
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Entry
GWO64_007075 CDS
T08010
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cmf
Corynebacterium macginleyi
Pathway
cmf03030
DNA replication
cmf03410
Base excision repair
cmf03420
Nucleotide excision repair
cmf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWO64_007075 (ligA)
03410 Base excision repair
GWO64_007075 (ligA)
03420 Nucleotide excision repair
GWO64_007075 (ligA)
03430 Mismatch repair
GWO64_007075 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmf03032
]
GWO64_007075 (ligA)
03400 DNA repair and recombination proteins [BR:
cmf03400
]
GWO64_007075 (ligA)
Enzymes [BR:
cmf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GWO64_007075 (ligA)
DNA replication proteins [BR:
cmf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GWO64_007075 (ligA)
DNA repair and recombination proteins [BR:
cmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GWO64_007075 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWO64_007075 (ligA)
MMR (mismatch excision repair)
DNA ligase
GWO64_007075 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GWO64_007075 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
HHH
Motif
Other DBs
NCBI-ProteinID:
QRJ57050
LinkDB
All DBs
Position
complement(1437811..1439871)
Genome browser
AA seq
686 aa
AA seq
DB search
MTNPADLRREWNDLAQEIRRHRNLYYNGEPTIPDADFDALFQRLKHLEDQHPELVVPDSP
TQQIGAAPNAGEDIKHLERMMSLDNVFNAGEMQDWLDRTPTATYLTELKIDGLSIDLVYR
NGRLDTAATRGDGTVGEEITANARVISDIPHELTGTDEYPVPELIEIRGEVYMRPADFEE
INEERAADGKARFANPRNAAAGGLRMKDPAEVKKRRLRMVCHGLGARAGFSPSSQHDAYK
AIAAWGLPVSPYTKQVHSAAEVQEEVSYWAEHRHDAIFEMDGLVVKVDDLSLQRQLGATS
RAPRWAIAYKYPPEEVTTKLKNIEVGVGRTGRVTPFAIMEPVFVSGSTVSMATLHNQSEV
KRKGVLIGDTIIIRKAGEIIPEVLGPVREQRDGSEYEWSFPTQCPACGTTLAPQKDGDAD
WRCPNNQSCPAQLSARLEYLASRKGLDIQALGEKGAMDLIKNGILTDESELFELTEEKLL
ASDVYTAKRDTKDKRSKKEGNVKVNTAGKNLLQNLEEVKDRDFWRVLVSLSIRHVGPIAA
RALAARYGSMEKLRAAKTEDLAEVDGVGTVIAESFHAWFEVDWHRTIVEKWADAGLAMKI
ATEDRLEQTLEGLIIVVTGSLEGFTRDSAKEAIISRGGKAPGSVSKKTSYLVAGANAGSK
ADKARELGVPILNEEQFRALLDTGEV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatccagctgatttgcgacgtgaatggaacgacctggcgcaggaaatacgccgc
caccgcaacctgtattacaacggcgagccaacaattcccgatgctgactttgatgcgctc
ttccagcgtttgaagcacttagaagaccagcacccggagctggtggttccggattcgccc
acccaacagataggtgcggcgccgaacgcaggcgaagacattaaacatctcgagcgcatg
atgagcctcgacaatgtctttaacgccggtgagatgcaggactggctggatagaacgcct
accgcgacctatctgacggagctgaagatcgacggtctatccatcgacttggtttaccgt
aacgggcgcttggataccgctgctacccgtggcgacggcaccgtgggcgaggagattacc
gccaatgcccgggttatttctgatattccgcatgaacttacgggtaccgatgagtatcca
gtcccggaacttattgaaatccgcggcgaggtctatatgcgccccgcggacttcgaagag
atcaatgaggagcgcgcggcagacggcaaggcgcggtttgccaacccccgcaacgccgcg
gccggtggactgcgcatgaaggaccccgccgaggtgaaaaagcgccgcctgcgcatggtc
tgccacggccttggggcgcgcgcagggttttccccgtcttcccagcacgatgcctataag
gccatcgcagcatggggtttgcccgtctcgccctataccaagcaggtccactccgccgca
gaagtacaagaggaggtatcttattgggccgaacaccgccacgatgcgatttttgagatg
gatggactcgtggtcaaggtggacgatttaagcttacagcgccagctcggggcgacctcc
cgtgcgccgcgctgggccattgcctataagtacccgccggaagaagtcacgacgaagctg
aaaaacattgaggtcggcgtggggcgtacggggcgcgttaccccctttgccattatggaa
ccggtctttgtctccggctccacggtgtccatggccactttgcataaccagtccgaggtc
aagcgcaagggtgtcctaatcggcgatacaattattatccgcaaagccggcgaaattatt
cctgaggtactaggccccgtgcgcgaacagcgcgatggcagtgaatacgaatggagcttc
cccacgcagtgcccagcctgtggcacgacgctcgcgccgcaaaaggatggcgacgctgac
tggcgctgccccaacaaccaatcctgcccggcccagctttccgcccgcctggaatatctt
gcctcccgcaagggccttgacattcaggcactgggggagaagggagctatggatctcatt
aaaaacggaatcctgactgatgaatccgaactctttgagctaacggaagaaaagctgctt
gcttccgatgtctatacggccaagcgcgatacgaaagataagcgcagcaaaaaagagggc
aacgtcaaggtcaatactgcaggaaagaacctgctgcaaaacttagaagaagtcaaagac
cgcgacttctggcgcgtgctggtctcgctatccattcgccacgtgggccccattgccgcg
cgcgccttggcagctcgctatggctccatggaaaagctgcgtgcagcgaaaacagaggat
ctcgccgaggtagatggcgtgggtacagtcattgcagaatccttccatgcctggttcgag
gtggactggcaccgcacaatagtcgaaaaatgggcggacgccggattagccatgaagata
gccaccgaggacagactggaacaaaccctcgaaggcctcattatcgttgttaccggcagt
ctcgaaggatttacgcgcgattctgctaaggaagccatcatcagccgcggcggaaaagca
cccggctccgtatcgaagaaaacctcttatctcgttgccggggcgaatgctggctccaag
gcggacaaggcccgcgagctcggggtgcccatcctcaatgaagagcaatttcgcgcgctt
ttagacaccggtgaggtatag
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integrated database retrieval system
