Clavibacter michiganensis subsp. michiganensis: CMM_1102
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Entry
CMM_1102 CDS
T00529
Name
(GenBank) putative efflux MFS permease
KO
K08167
MFS transporter, DHA2 family, multidrug resistance protein
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmi02000
]
CMM_1102
01504 Antimicrobial resistance genes [BR:
cmi01504
]
CMM_1102
Transporters [BR:
cmi02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
CMM_1102
Antimicrobial resistance genes [BR:
cmi01504
]
Gene variants
Quinolone resistance genes
Transporter
CMM_1102
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump QacA [MD:
M00714
]
CMM_1102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
CAN01145
UniProt:
A5CPZ2
LinkDB
All DBs
Position
1261961..1263502
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AA seq
513 aa
AA seq
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MSTPRTASVPVTAATGRAGRRQWAALVVLMLPVLLVSIDNTVLSFAMPSIARDLEPSGAA
QLWIIDAYPLVLAGLLVAMGNMGDRYGRRRLLMIGAAGFGVVSALAAFATDASQLIAARA
ALGFFGAMLMPSTLSLLRSIFTDRKQRRLAIAIWASGFSGGSALGPLVGGVLLEHFWWGS
VFLVAVPVLLPLLILTPVLVPESKDPAPGPIDGVAILLSLATVAPIVYAIKTFATEGVTP
LAIAAPVVGVVAGILFVRRMSRARNPMLDVALFREPVFTGAVLVNLLSVVSLVGFLFFVT
QHLQLVAGLDPLAAGFALIPGSVVVIVSGLVIVPIVARARPSRVVAIALAFSAVAYVVLA
VTGKGASVGLLVFAFCLLGAGIGASQTISNDLIIAAVPPAKAGAASAVSETAYEVGAVLG
TAVLGSILTASYRTGLVLPAGLSEGDASAARETLGGAVSVAERVPADVGSALLESAHAAF
DGGVVTTSIIGALLMVGAIVISLTSLRRASSHD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccccgcaccgcatccgtccccgtgaccgccgccaccggccgcgccgggcga
cgccagtgggccgcgctcgtcgtgctgatgctcccggtgctgctcgtctccatcgacaac
acggtgctgagcttcgcgatgccgtccatcgcgcgcgacctcgagccgtcgggcgcggcg
cagctctggatcatcgacgcctacccgctcgtgctcgccgggctcctcgtcgcgatgggc
aacatgggcgaccgctacggccgccggcgcctgctcatgatcggcgcggccggcttcggc
gtcgtctcggccctggccgccttcgccaccgacgcctcgcagctcatcgccgcacgcgcc
gccctcggcttcttcggcgcgatgctcatgccgtccacgctgtcgctcctccgttcgatc
ttcaccgaccggaagcagcgccgcctcgcgatcgcgatctgggcgtcgggcttctccggc
ggatccgcgctcggcccgctcgtcggcggcgtgctgctcgagcacttctggtggggatcc
gtcttcctcgtcgcggtgcccgtgctgctgccgctgctgatcctcacacccgtgctcgtc
cccgagtcgaaggacccggcgccgggcccgatcgacggggtcgccatcctgctgtcgctc
gcgaccgtcgcgcccatcgtctacgccatcaagacgttcgccaccgagggcgtcacgcct
ctcgcgatcgccgcccccgtcgtgggcgtggtcgccggcatcctcttcgtgcgtcgcatg
tcgcgcgcccggaacccgatgctcgacgtcgcgctgttccgcgagccggtcttcacgggc
gcggtgctcgtcaacctgctgagcgtcgtctcgctcgtcggcttcctcttcttcgtgacg
cagcacctgcagctcgtcgcgggcctcgacccgctggcggcgggcttcgcgctcatcccc
ggatccgtggtcgtcatcgtctcggggctcgtgatcgtgccgatcgtggcgcgggcccgc
ccgtcgcgcgtggtcgcgatcgcgctggcgttctcggccgtcgcctacgtggtcctcgcg
gtcacgggcaagggcgcatccgtcgggctgctggtcttcgcgttctgcctgctgggcgcg
ggcatcggcgcgtcgcagaccatctccaacgacctgatcatcgcggccgtcccgccggcg
aaggcgggggcggcgtccgcggtgtcggagactgcgtacgaggtgggcgcggtgctcggc
acggccgtgctcggcagcatcctcacggccagctaccgcaccgggctcgtcctccccgcc
ggcctctcggagggggacgcctccgcggcccgggagacgctcgggggagcggtgtcggtc
gccgagcgcgtgccggccgacgtgggatcggcgctgctggagtcggcgcacgcggccttc
gacggcggcgtggtgaccacctcgatcatcggcgccctgctcatggtcggcgcgatcgtc
atctcgctcacgagcctccgccgcgccagctcgcacgactga
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