Clavibacter michiganensis subsp. michiganensis: CMM_2489
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Entry
CMM_2489 CDS
T00529
Symbol
ispDF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00900
Terpenoid backbone biosynthesis
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
Module
cmi_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CMM_2489 (ispDF)
Enzymes [BR:
cmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CMM_2489 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
CMM_2489 (ispDF)
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Motif
Pfam:
IspD
YgbB
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
CAN02570
UniProt:
A5CTY4
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All DBs
Position
complement(2804849..2806081)
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AA seq
410 aa
AA seq
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MSHDPVVPSAPATDGGATDGPRLGVVVVAAGSGTRLGAGIPKALVEVGGVTLLARSLSSV
LGLAEEAHVVVVAPDTHLAETSAVVDAVAGAARGSVAVVVGGATRQGSVRAGLAALVGSV
DTVLVHDAARALTPTDLFAAVARAVRAEGAGVVPGLPVTDTVKRVDPAGECLGTVDRSDL
VGVQTPQGFPRAALDAAYARAAAEHTDDAALFQASGGRVRVIPGDALAFKVTTAWDLRRA
EELVARDAGAGSASSRLRSGIGTDVHAVDASQPLWLAGLHWPGEAGLAGHSDGDAVSHAM
CDALLSAAGLGDIGGIFGTDDPELDGAHGEVFLRRTAELVRDAGYRIVNVAVQVMAVRPK
LSPRRAEAERILSAAVGAPVSLAGTTTDGLGFTGRGDGVAAVATALVERL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaccccgtcgtcccgtccgcccccgcgaccgatggcggcgcgacggacggg
ccacggctgggcgtcgtcgtcgtggccgcgggaagcggcacgcggctcggggcggggatc
ccgaaggcgctcgtggaggtcggcggcgtgacgctgctggcccgctccctgagctcggtc
ctcggcctcgcggaggaggcgcacgtcgtcgtcgtggcgccggacacgcacctggccgag
acatccgccgtcgtcgacgcggtcgcgggcgcggcacgcggatccgtcgcggtcgtcgtc
gggggagcgacccggcagggatccgtgcgggcgggcctcgccgcgctcgtcggatccgtc
gacacggtcctggtgcacgacgccgcgcgcgcgctcacgcccaccgacctcttcgccgcc
gtggcgcgcgccgtccgcgccgagggcgccggggtcgtccccggcctgcccgtcaccgac
accgtcaagcgcgtggatccggcgggggagtgcctcggcaccgtcgaccgcagcgacctg
gtcggcgtccagaccccgcagggattcccgcgggccgcgctcgacgccgcctacgcacgg
gccgccgccgagcacacggacgacgcggccctgttccaggcgtcgggcggacgcgttcgc
gtgatccccggcgacgccctcgccttcaaggtcaccaccgcgtgggacctccgtcgcgcg
gaggagctcgtcgcccgggacgcgggcgcgggatccgctagctcgcgcctccgctcgggc
atcggcaccgacgtccacgcggtcgacgcctcgcagccgctctggctcgccggactgcac
tggccgggcgaggcgggtctcgcggggcacagcgacggcgacgcggtcagccacgcgatg
tgcgacgcgctcctctccgccgcgggcctcggcgacatcggcgggatcttcggcaccgac
gacccggagctggacggcgcgcacggcgaggtcttcctgcggcggaccgcggagctcgtc
cgcgacgccggctaccggatcgtgaacgtcgccgtgcaggtcatggcggtacgcccgaag
ctgtcgccgcggcgggcggaggccgagcggatcctctcggccgccgtgggcgcgcccgtc
tcgctcgccggcacgaccaccgacgggctcggcttcacgggtcgcggcgacggcgtcgcc
gcggtcgcgacggccctcgtcgagcgcctctga
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