Caldinitratiruptor microaerophilus: caldi_23280
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Entry
caldi_23280 CDS
T08566
Symbol
ntH
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
caldi_23280 (ntH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmic03400
]
caldi_23280 (ntH)
Enzymes [BR:
cmic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
caldi_23280 (ntH)
DNA repair and recombination proteins [BR:
cmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
caldi_23280 (ntH)
Prokaryotic type
caldi_23280 (ntH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
DUF4317
Motif
Other DBs
NCBI-ProteinID:
BDG61238
UniProt:
A0AA35CMQ8
LinkDB
All DBs
Position
complement(2367734..2368453)
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AA seq
239 aa
AA seq
DB search
MTGEPMQPDTEWILSTLAELYPNPRTALHFETPFQLLIATMLSAQCTDKRVNIITQRLFP
RLGGPEDFLKLPQEALEDLIRDCGLYREKARNIRETCRLLLERHGGEVPARFEDLVRLPG
VGRKTANVVLANAFGIPALAVDTHVFRVANRLGLARGRTPEEVERQLTARIPRDRWIPAH
HWLIYHGRNVCHARSPRCEACPLRPECAHARAQAAGTGPAAWAGERVAGGSGAGARERT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ttgacgggcgaaccgatgcagccggacaccgagtggatcctttccaccctggccgaactg
tacccgaacccgcgcacggccctgcacttcgagacgccgtttcagctcctgatcgcgacg
atgctgtcggcgcagtgcacggacaagcgggtgaacatcatcacgcagcggctgttcccg
cgtctcggggggcccgaggatttcctgaagctgccccaggaggcgctcgaggacctcatc
cgggactgcgggctctaccgggaaaaggcgcggaacatccgggagacgtgccggctcctc
ctcgagcgccacggcggcgaggtgcccgcgcgcttcgaggacctggtccgcctgcccggc
gtggggcggaagaccgcgaacgtggtgctggcgaacgccttcggcatcccggcgctggcc
gtcgacacgcacgtgttccgggtcgccaaccgcctcggcctggcccgcgggcgaacgccc
gaggaggtcgagcggcagctgacggcccggatcccccgggacaggtggatcccggcccat
cactggctcatctaccacgggcgcaacgtctgccacgcccgttcgccgcgctgcgaggcc
tgcccgctccggccggagtgcgcccacgcacgggcccaggccgccggaacggggccggcg
gcctgggccggagagagggtggcaggcggatcgggcgccggcgcacgggagcggacctag
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