KEGG   Christensenella minuta: B1H56_04290
Entry
B1H56_04290       CDS       T05665                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cmiu  Christensenella minuta
Pathway
cmiu03030  DNA replication
cmiu03410  Base excision repair
cmiu03420  Nucleotide excision repair
cmiu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1H56_04290
   03410 Base excision repair
    B1H56_04290
   03420 Nucleotide excision repair
    B1H56_04290
   03430 Mismatch repair
    B1H56_04290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmiu03032]
    B1H56_04290
   03400 DNA repair and recombination proteins [BR:cmiu03400]
    B1H56_04290
Enzymes [BR:cmiu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B1H56_04290
DNA replication proteins [BR:cmiu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B1H56_04290
DNA repair and recombination proteins [BR:cmiu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B1H56_04290
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1H56_04290
   MMR (mismatch excision repair)
    DNA ligase
     B1H56_04290
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B1H56_04290
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 BRCT_2 PTCB-BRCT HHH DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AYH39763
UniProt: A0A136Q301
LinkDB
Position
complement(886198..888177)
AA seq 659 aa
MERMKELVDQLNDYAYRYYVLDDPSVADAEYDRLYDELAALEKRTGKIEPDSPTQRVGGK
LLEGFQKHTHLAPLWSLDKAQSLDDVISWQERTNKQIRALGLPDASYSLEYKFDGLTINL
TYDGGYLVSAATRGNGIVGEDVTEQVKTIQSIPLKIDFTGKTEVQGEAVMRLSVLKKYNE
TADEPLKNARNAAAGAIRNLDPGQTAKRHLDAFIYNVGYIEGRTFQDHQEMIAFLRENKF
NVSAYERVFNDVADIKAAVDNVERTRDTLDFLIDGMVIKITDFATREALGYTQKFPRWAI
AYKFAAEEMTTKILDVTWDVGRTGKLTPLAHLEPVELAGATIRRATLNNYEDILRKHAAI
GANVFIRRSNDVIPEILGASPLQEGELTPIDKPTHCPACGTELEEVGPNLFCPNSLNCKP
QLTSRMVHFVSRDAMDIENLSEKTIELMFEKLDIKDIAAIYTLTDKQLLSQEGFKEKRTE
NILSAIEASKKPPLANFIYALGISNVGKKTAKDLAQTFHTYERLKNATIEELVAIRDVGE
VVAKDIVDFFRNENYMRVVQELFDAGVQPREDAGAAEGGKFEGKTFVLTGTLTQYTRKQA
QELIENLGGKTSSSVSKKTDYVVAGEEAGSKLRKAQELGVAVLSENEFVRVCCKELELC
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggagcgtatgaaagagctggtcgatcaactgaatgattacgcataccggtactatgtg
cttgatgatccgtcggtcgctgacgcggagtatgacagactctatgatgagcttgcggcg
cttgagaagaggactggaaaaatcgagcccgattccccgacgcagcgtgtgggcggaaag
cttctggaaggattccaaaaacatacgcaccttgcgccgctgtggagccttgacaaagcg
cagagccttgacgacgttatttcctggcaggagcgtaccaacaagcagatacgggcgctc
gggctgccggacgccagctattctctcgaatacaagtttgacggccttacgatcaacctg
acctatgacggcggatatctcgtcagtgctgcaacgcgcggaaacggaattgtgggggaa
gatgtcacagaacaggtgaaaacgatacaatccatccctttaaagatcgatttcacgggc
aaaacagaagtgcagggagaggcggtcatgcgtctatcggtactgaaaaaatataatgaa
acggcagatgagccgctcaaaaatgcgcgtaatgcagcggctggggcaatcaggaacctt
gacccgggccagaccgcaaaaaggcatttagacgcctttatttataacgtggggtatatt
gaaggcaggacgtttcaggatcatcaggagatgatagcgttcctccgggagaacaaattc
aatgttagcgcctatgaaagggtttttaacgacgtagcggatatcaaggcagcggtagac
aatgtggagcggacgcgtgacacgctggatttcctgatcgacggtatggtaatcaagata
acggactttgcaacgcgtgaagcactgggctatacgcagaaatttccgcgctgggcgatc
gcttataaatttgccgcagaagagatgacaacaaaaattttagacgtgacatgggatgtg
ggcaggacgggtaaactgacgcctttggcacatcttgaaccggttgagcttgcaggggcg
acgatccgcagggccacgctcaacaattatgaagatatcctccgcaagcatgccgctatc
ggcgcgaacgtattcatccggcgttctaatgatgtgatcccggaaatactgggcgcatct
cctttacaggagggtgagcttacgccgattgataaaccgacgcattgcccggcctgcgga
acggagctcgaggaggtaggaccgaatcttttctgccccaattcgctgaactgtaaaccg
cagctcacttcgcgcatggtgcattttgtgtcgagagacgcaatggatattgaaaacctc
agtgagaaaacgatcgaactgatgtttgaaaagcttgacatcaaagatatcgcggcgatt
tatacattgacggacaagcagcttttgagccaggaggggtttaaggaaaagagaacggag
aatattctttctgctattgaagcgagcaaaaaacctccgcttgcgaattttatttatgcg
ctcggcatttcgaatgtcggaaaaaagaccgccaaggaccttgcccagacgtttcatact
tatgaacgactgaaaaatgcgaccatagaagagcttgtggcaattcgggacgtgggagag
gttgtggcaaaggatatcgtcgattttttccgcaacgaaaattacatgcgtgtcgtgcag
gagcttttcgacgcaggcgtgcagccgagggaggatgccggggctgcggaaggaggtaaa
tttgaggggaaaacatttgtgctgacgggaacgcttacccaatatacgcgcaagcaggcg
caggagctcattgaaaatctcggcgggaagacaagttcttccgtcagcaaaaaaacagat
tatgtagtggcgggcgaggaagctggcagcaagctccggaaagcgcaggagcttggtgtc
gcggtattatcggaaaatgagtttgtgagagtatgttgtaaggagttggaattatgctga

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