Callorhinchus milii (elephant shark): 103175325
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Entry
103175325 CDS
T03088
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04620
Toll-like receptor signaling pathway
cmk04621
NOD-like receptor signaling pathway
cmk04622
RIG-I-like receptor signaling pathway
cmk05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103175325 (traf3)
04621 NOD-like receptor signaling pathway
103175325 (traf3)
04622 RIG-I-like receptor signaling pathway
103175325 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103175325 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-TRAF_2
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-rbx1
DUF2968
zf-RING_5
TPR_MLP1_2
zf-RING_UBOX
Sina_ZnF
DUF2203
zf-C3HC4_4
Exonuc_VII_L
DUF745
ATG16
Motif
Other DBs
NCBI-GeneID:
103175325
NCBI-ProteinID:
XP_042194173
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MTAMNQRFGRPQAMAAGRNIESHQLSLQSPLQQANVSHPQDSRSLCATIEPKHGGFKERF
LLKLEEKYKCEYCRHALCNPKQTECGHRFCESCLSNVFRNQNPVCPVDNEPLFETKVFKD
ICCKREILSLKIYCRNEKNGCKDQLCLGKLEAHLLECPYQEVRCTRRGCTERVQRKDLAD
HLNSSCKYREQACKFCRKEITMAELKKHEELECPSVLVKCPNKCNVSVLRSELSSHLLQC
PNVVVHCSYSNYGCNFLGTNQELKTHEANAMAQHLNLSMIRNVDNETKVSQLQNELQDKC
KIIQSMSIQISTLEKELVKFGQLANKNEGRLGHLQKMLANQTDQLFTINQASQQTHQRQE
ETIREVKVVKESVDGLQTRVRQLEVTSRAGNAGAGQSSLTGLDNQVRRHDSLLSVHDVRL
ADMDLRFQVLETASYNGKLIWKIREYTRRKQEAVSGKTLSLYSQPFYTGYFGYKMCARVY
LNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLLDQGAEESHLGDAFKPDPNSS
SFKRPLGEMNIASGCPLFVTQTVLESRTYIKDDTIFIKVSVDTSDLPDP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatgaatcagagatttggacggccacaggccatggcagccggaagaaacata
gagtcgcaccagctttctctgcagtcacctctgcaacaagctaatgtctctcatccccaa
gatagcaggtcactgtgcgccaccatcgagcctaagcatggaggcttcaaggagaggttt
ctgcttaaactggaggagaagtacaaatgcgagtattgccgtcatgcactttgcaatcca
aagcaaactgaatgtggccacaggttctgtgaaagctgcttgagtaacgtttttcggaat
cagaatccagtttgtccagttgacaatgaacctttatttgagactaaggtatttaaagac
atctgctgcaaaagagagattctaagtctcaaaatctactgtaggaacgagaaaaatggt
tgcaaagaccagctatgcctaggaaaacttgaggcccacctacttgaatgtccttatcag
gaggtccgttgtacacgcaggggatgtacggagagggtgcagaggaaagatctagctgac
catttaaattcaagctgcaaatatcgggaacaggcgtgtaaattctgcaggaaagaaatc
acaatggcagagctgaagaaacacgaagagttggaatgtccatcagtgctcgtgaagtgc
cccaataagtgcaatgtttctgttctgaggagtgagttaagtagccacttgttacagtgt
cccaatgtagttgtccactgcagttactctaattacggatgtaacttcctgggaactaac
caggagcttaaaacacatgaagctaacgctatggcacagcatttgaacctttcaatgatt
agaaatgtagataacgaaaccaaggtttcccagctccagaatgaactgcaggacaagtgt
aaaattatccagtccatgtccattcagataagcaccttggagaaagaactggtcaagttt
gggcaactcgcaaataaaaatgaaggtcggctgggccacttacagaaaatgttggccaac
cagacggaccaactgttcaccattaatcaagcttcacaacagactcaccagaggcaggag
gagacgatccgggaggtgaaggttgtcaaagaatctgtggacggactccaaacgagagtg
aggcagctggaagtcaccagcagagctgggaatgcgggtgctggacagagcagtctgact
ggattggacaatcaagtaaggagacacgacagcttgctcagtgttcacgacgtccgcctg
gcagacatggaccttcgatttcaagtcttggagactgccagctacaacggaaagctcatc
tggaaaatccgggagtacacccgccggaaacaggaggctgttagcggaaaaacattatcc
ttgtacagccagcccttctacacaggatattttggctacaagatgtgcgcccgggtttat
ctcaatggggacggtatgggcaaagggactcatttgtcactgttttttgtagttatgcgg
ggagaatatgatgccctgctaccctggccctttaaacagaaagtaactttgatgctgtta
gatcaaggagcagaagaaagtcatttgggcgatgctttcaagccagatcccaacagtagc
agcttcaagcgcccgctaggagagatgaacattgcttccggctgccctctctttgttaca
cagactgtcttggaaagcaggacttatattaaggacgacacgatctttatcaaagtaagc
gttgatacttcagatttgcctgacccatga
DBGET
integrated database retrieval system