KEGG   Callorhinchus milii (elephant shark): 103176744
Entry
103176744         CDS       T03088                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cmk03037]
    103176744 (ift122)
Cilium and associated proteins [BR:cmk03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   103176744 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Zn_ribbon_IFT122_C WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 EIF3I WDR55 Beta-prop_TEP1_2nd TPR_GEMI5 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR19_1st TPR_IF140-IFT172 Beta-prop_EML Beta-prop_WDR35_TULP_N TPR_IFT80_172 Beta-prop_IFT140_1st B-prop_COPA_B_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th WD40_like TPR_COPA_B eIF2A Beta-prop_IFT140_2nd Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 103176744
NCBI-ProteinID: XP_042195371
LinkDB
Position
Unknown
AA seq 1186 aa
MRAVPTWIDRVHDREKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDASDGTLIQPLKGHRD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCIAYNPVTHQLASCSSS
DVGLWSPEQKSVSKHKVNSKVTCCGWTNDGQYLAIGLFSGVVSIRNKSGEEKVRIERPGG
SLSPIWSICWNPSKEEHNDILAVADWGQRLSFYQLSGKQIGKDRALNFDPCSVSYFSKGE
YIIMGGSDKQVSLYTKDGVRLGTVGEQQSWVWTCKVKPDSNYVVVGCQDGTIAFYQIVFS
TVHGLYKDRYAYRESMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYE
LFSEDNTDMHYRVKEKIAKKFECNLLVVCSQNVILCLEKRLQCLSFNGVKEREWLMESLI
RYIKVIGGPSGREGLLIGLKNGQILKIFVDNPFAIVLLKQATSVRCLDMSASRNKLAVVD
EHNTCLVYDISSKELLFQEPNANSVAWNTQCEDMLCFSGGGFLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYAMSAVEVPQSAPMYQYLEKKMFKEAYQIACLGVTENDWRDLAMEA
LEGMDFDIAKKAFIRGRDLRYLELISTIEERKKRGENDNELFLADVCAYQGKFHEAAKLY
KKTGNDSRALNMYTDLRMFEYAKDFLGSGDPKDTKMLITKQADWARNIHEPKAAAEMYLS
AGEHLKAIEIIGDHGWVDMLIDIARKLDKAEREPLSRCAYFFKSLQHPGYAAETYLKMGD
LQALILLHVETQHWEEAFSLVEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQDE
AVKVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIAREKEEKQQEMLKTFHHFQRLAELY
HAYHSIQRYTDEPFSSHLPEALFNISRFLLHNLTKETPLGISKINTLYALAKQSKALGAF
KLARHAYDKLQGLRIPSRFQESIELGSLTIRSKPFHDSEEFVPMCYRCSTNNPLLNNQGN
VCINCRQPFVFSASSYEVLPLVQFYLDEGITDEEAVALIDREVPRAEAKKDGWLENNSAD
VQTLRLEDNMTKVQTDPFTAKLSFEQGGSQFVPVIVNRTVLQSMSRRDVLIKRWPKPLKW
HYYRSLLPDVSITMCSSCFQMFHSEDYELLVLQHNCCPYCCRPIDE
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgcgggccgtgcccacctggatagacagggtccacgaccgggagaaggtcgagcagtgt
atctacgaccttgcattcaaaccggatggaacccagctgatagtcgcagcagggaaccga
gttttggtatatgatgcgtctgatggaactctcattcaaccacttaagggacaccgggac
acagtgtactgtgttgcctatgctaaagatggtaagcgttttgcatcaggttctgctgac
aagagcatcattatctggacctcgaagttggaaggcattttaaaatacacgcataatgat
tccattcaatgcattgcttataacccagtcactcaccagctggcttcatgttcctccagt
gatgttggtttgtggtcaccagagcagaaatccgtctccaagcacaaagtaaacagcaaa
gtcacctgctgcggttggaccaatgatggacagtacctggcaatcgggctgtttagtggt
gtagtgagtatccgaaataagagtggagaagagaaagtcagaattgagcgacccggtggt
tccctctctcctatctggtcgatttgctggaatccatccaaggaggaacacaatgacatt
cttgctgtggcagactggggtcaaagactgtccttctaccaactgagtggcaaacagatt
gggaaagacagagcactgaattttgacccttgcagtgtcagttatttctccaagggagaa
tatataataatgggaggatccgataagcaagtctctttgtacaccaaggatggggtgcgt
ctcggtactgttggagaacaacaatcttgggtgtggacctgcaaggtcaagccggactcc
aattatgtcgttgtgggctgtcaggatgggaccattgccttttaccaaatcgtttttagc
acagtccatggtttgtataaggaccgctatgcttacagggaaagtatgaccgacgtcatt
gttcagcacctcatcactgaacagaaagtgcggatcaaatgcagggaactagtgaagaag
attgctatatataagaaccgattggcaatacagctgccagaaaaaatactgatttacgag
ctattttcagaagataatactgacatgcattaccgggtgaaagagaagattgctaaaaaa
tttgaatgcaacttgttagttgtgtgctctcagaatgttatcttgtgcctggagaagaga
ctgcagtgtttgtcattcaatggtgtgaaagagagggaatggctcatggaatcgctcatc
cgttatattaaagtcatcggaggaccatcaggaagagagggcctcttaattggtctaaag
aatggccagattctcaaaatatttgtagacaatcccttcgccattgtgttgctcaagcaa
gcgacatctgtacgctgcctagacatgagtgcatctcgcaataaactagcagtggttgat
gaacacaacacctgcttggtgtatgacatcagtagcaaagaattacttttccaggagccc
aacgctaacagtgtagcttggaacacccaatgtgaggacatgctctgtttctctggtggt
ggttttctcaacatcaaagccagtaattttccggtccaccaacagaagcttcaaggtttt
gtcgtgggctacaatgggtccaagattttttgcctgcacgtgtatgccatgtctgcagtg
gaggtcccacagtctgcgcccatgtaccagtacctggaaaagaagatgtttaaggaagcc
tatcaaattgcctgtttaggagtaacggaaaatgattggcgagacctggccatggaagcc
ttggaaggaatggactttgatattgctaaaaaggcatttatcagaggtcgagacctccgc
tatctagaacttattagcacaattgaggagcgtaaaaagcgtggtgagaatgacaacgag
ctgtttttagcagacgtgtgtgcctaccagggcaagtttcacgaggcagccaaactgtac
aagaagacaggaaacgatagcagagcgctgaacatgtacactgatctgcgcatgtttgag
tacgcgaaggatttcctcggctcaggcgatcccaaagacaccaagatgttgatcactaaa
caagcagactgggccaggaatatccatgaaccaaaggcagcagcagagatgtacctttct
gctggggagcatctgaaagctatcgagatcatcggtgatcatggctgggtcgatatgtta
atcgacatagctcgaaaactggacaaggctgagcgggagcccctatcaagatgcgcttat
ttctttaagagtctgcagcatcctggctatgctgcagagacatacttgaagatgggggac
ctgcaagccctgatcctgttacatgtagaaacacagcattgggaggaggctttctctttg
gtggaaaaacacccggaattcaaagacgacgtgtatgtgccgtacgcgcagtggctcgcg
gaaaacgatcggttcgaagaagcccagaaagcgttccacaaggctgggcgtcaggatgaa
gccgtcaaagtcctagagcagctcacccacaacgcagtggtagaaagccggttcaatgac
gctgcctattactattggatgctgtccatgcagtgtctggacatagctcgggaaaaagag
gagaagcaacaagagatgctgaaaacgtttcatcatttccagcgcttggctgagctgtac
catgcctaccactcaatccagagatacacggacgagcctttcagttctcatttacctgaa
gcactcttcaacatttcccgatttctgctccacaatcttactaaagaaactcctttaggc
atctccaaaatcaacactctgtacgctttggccaagcaaagcaaagcgctgggcgccttc
aaacttgcccgccacgcgtacgacaagctgcagggcttgaggattccatccaggttccag
gagtcgatcgagttgggcagcctgacgattcgatccaagccgtttcatgacagtgaggag
tttgtgcctatgtgctataggtgctcaacgaacaatcctctgctgaacaatcagggaaat
gtgtgcatcaattgtcggcaacccttcgtcttctctgcttcctcttacgaggtgctgcca
cttgttcagttctacctggatgaaggcattacagatgaggaggccgtggcacttattgac
cgtgaagtgcccagagcagaggcaaaaaaggacggctggcttgaaaacaacagtgctgat
gtacagacactaaggcttgaggataacatgaccaaggttcagacagacccgttcactgca
aaactgagttttgagcaaggaggctctcagtttgtccccgtgatcgtgaacaggacagtg
ctgcagtcaatgagcagaagggatgttctaatcaaacgctggccaaagccactaaaatgg
cactattatcgatcgttgctacctgacgtgtccatcacaatgtgctcttcctgcttccag
atgtttcacagtgaagactatgaactactggttcttcagcacaactgctgtccttactgc
tgcagaccgatagatgagtga

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