Callorhinchus milii (elephant shark): 103178073
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Entry
103178073 CDS
T03088
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103178073 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103178073 (c9orf72)
Membrane trafficking [BR:
cmk04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
103178073 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
YbjQ_2
Motif
Other DBs
NCBI-GeneID:
103178073
NCBI-ProteinID:
XP_007890773
UniProt:
A0A4W3HM76
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSSSCPPQSPAVAKTEILLDGESPLVAATFAYWDNILGPRVRHIWAPKNEQMLLSDGEIT
FLANHTLNGEILRSAKSGAIDVKFFVLAEKGVIIVSLIFDGNMNGDRSTYALSVILPQSE
LSFYLPLHRVCVDRLTHIIRKGRIWMYKGQSIISFLTTEITPVMELFSSMKAYGVVEEVQ
IKETVLNDDDIGDSCREDFLHKAISSHLQTCGCSVVIGSNPDKVNKMVRTLCLFLTPAER
QCSRLANANGSFRYDPGLFVQGLLKDATGSFVLPFRQIMYAPYPTTHIDVDVNTVKQMAP
CHEHIYNQQHYMTSELIVLQKIASEDDMIPDTVIHMDESFTPNLNIFQDVMHRDTLVKSF
LDQIFQLKSGLSLRSIFLAQFLLVLYRKAQTVIKYIEDETQKGKKPFKSLRNLKTDLDLT
VEGDLSIIMALAEKLKPGLHSFIFGKSFYTSVQERDVLMSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttgcccaccacaatctccagctgttgcaaaaacagagatcttgctggat
ggtgaatcaccattggtagctgctacttttgcttattgggataacattcttggtccaaga
gtgagacacatctgggcgccaaagaatgaacagatgctgctaagtgacggagaaataaca
tttctggcaaaccacacactaaatggagaaattcttcgaagtgccaaaagtggtgcaatt
gatgtcaaattcttcgtacttgctgaaaagggggtaatcatagtgtcattaatatttgac
ggcaatatgaatggtgaccggagtacttatgcactatcagtcatactgccacagtctgaa
cttagcttctacctacctctgcacagagtatgtgtggatcgactgacacacattattaga
aaaggaaggatatggatgtataaggggcagagcataatttccttcttaacaacagaaatc
actcctgttatggaattattttcatctatgaaagcgtatggcgttgtggaagaagttcaa
atcaaggagactgtgctgaatgatgatgatattggagatagctgccgtgaagatttcctg
cacaaagccattagctctcacctacagacatgtggatgctctgttgttatcggaagcaat
ccagataaagtaaacaagatggtccgcactctgtgcctcttcctgactccggcagaacgg
cagtgctcacgacttgccaatgccaatggctctttcagatatgacccaggtctttttgtt
cagggcctcttaaaggatgctactggtagctttgtgttgcctttccgtcaaattatgtac
gctccatacccaactacacacattgacgtagatgttaacacagtgaagcagatggcccca
tgccatgaacatatctataaccagcagcattacatgacatcagaacttatagtacttcaa
aagattgcatcagaagacgacatgattcctgatactgtaattcatatggatgaaagcttt
acacctaatctgaatatcttccaggatgtgatgcatcgagacacattagtgaagtcattt
ttagatcagatttttcagctgaagtctggtttatccctgaggagcattttcttggcacag
tttcttcttgttctctacagaaaagctcaaacagtgataaaatacatagaggatgaaact
caaaagggaaagaagcctttcaaatcactgcgaaatctgaagactgaccttgaccttaca
gtagagggtgacttgagcattattatggccttggctgagaaattaaaacctggcttgcac
tcatttatttttggaaagtctttctacactagcgtgcaagaacgagatgtactaatgtca
ctttaa
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