Callorhinchus milii (elephant shark): 103178626 Help Entry 103178626         CDS       T03088                                  Symbol lig4 Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cmk00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     103178626 (lig4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cmk03400]     103178626 (lig4) Enzymes [BR:cmk01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103178626 (lig4) DNA repair and recombination proteins [BR:cmk03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      103178626 (lig4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase Motif Other DBs NCBI-GeneID:  103178626 NCBI-ProteinID:  XP_007891664 UniProt:  A0A4W3H3U4 LinkDB All DBs Position Unknown AA seq 914 aa AA seqDB search MAASTSSDSSLKVTVASKVPFADLCSTMEKIQKNKARADKNKFFQDFLESWRSFHNALHK NDPNTTDSFYPAMRLILPQMERERMAYGIKETMLAKLYIEVLGLSKDGKDALKLLNYRAP TSSHGGVGDFAEIAFFVLAQRCSDQCTLTVQEVNEHLDSIALNNSAKRKNQVKKSLLDLI RQSTALQQKWLIRMILKDMKLGISQQTIFQLFHPDAAELHSVTTDLERVCKQLHDPNVSL SDVSIMLFSAFKPMLAAVTNIKNIEKQMHNQSFYLETKLDGERMQLHKDGDVYKYFSRNG YDYTQQFGTSPLVGSLTPFIHRVFKPTIQNCILDGEMMAYNPTTQTFMQKGNKFDIKRMV EDSDLQTCFCVFDVLMVNGKKLAHETLRNRHETLQAIFTPVPGRVQVVEKIEMNTKKDVA DALNEAIDKREEGIMVKDPLSVYKPDKRGEGWLKIKPEYIDGLMDELDILIVGGYFGKGH RGGMVSHFLCAVAEPPSPGDKPSVFHSLCRVGSGYTMKELYDLGLKLADHWKPYHRRDAP ANILCGTEKPEVYIEPCNSVILQVKAAEIVKSDMYKTSCSLRFPRIERIRDDKEWYECMT LNDLDQLQNMAEGKLASKHVDMNDEEPHKKKRKAVPKVKKVVGIAEQFKGQDLSCVDKVS SIFDDVEFCVLNGPHNHPKADLEKGIAECGGLVVQNPGPDTYCVVADTVNVRVKNLIAAN THDVVMVDWLLNCLQKKQILPWQPKHMIHMSPSTEEHFAQEYDHYGDSYFVNTDESQLRE VFKRMDQPEQKFSFETIADLEQRYSWDTSPLSMFRHCVIYMDMDFPSAISDPNSQIRDTS LDLRALELRYYGAKVVGELNEGVSHVVKHDRGQHLQKLKSLRRTFERKFKIVSESWVTDS VKAGIVQDERNYLL NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggctgcatcaacgtcatcagatagttcattgaaagtgactgtagcctctaaagtacct tttgctgatctgtgttcaacaatggaaaaaatacagaagaataaggctagggcagataag aataagtttttccaagattttctggaatcatggagaagttttcataatgctcttcacaaa aacgatccaaatacgactgattccttctacccggcaatgcgtctgattctcccccagatg gaaagggagagaatggcatatggaatcaaagagacaatgcttgcaaagctttacattgaa gttcttggattgtcaaaagatggtaaggatgccctgaaactcctaaactatagagctccc actagctcacatggtggggtgggtgattttgctgagattgcattttttgtgctggcgcag aggtgttcagatcagtgtacgctaactgttcaggaggtaaatgagcacttagactctatt gcactgaacaattctgccaagagaaaaaatcaagtgaaaaagagtctgctggacttaatt agacaaagcacagcactccaacaaaaatggcttatccgtatgatcttgaaagacatgaaa ctaggcatcagtcaacaaactatatttcagttattccatccagatgcagctgaactgcac agtgtgacgacggacttagaaagagtttgcaagcaacttcatgatcccaatgtgtccctc agtgatgtttccatcatgttgttttctgcattcaaacctatgcttgctgctgtaaccaac ataaaaaatattgaaaagcaaatgcacaatcagagtttctatttggaaactaaacttgat ggggaacgcatgcagcttcacaaagatggagatgtttataagtatttttctcgtaatggc tatgattatacccagcagtttggtacttctccgttggtgggatccttgacaccattcatc catagagttttcaagcccacaatacagaactgtattcttgatggagagatgatggcctat aaccccactacccaaaccttcatgcagaaaggaaacaagtttgacatcaaaagaatggtg gaagattcagacctacaaacctgcttctgtgtctttgatgtattaatggtaaacggaaag aagctggcacatgagactctccgcaatagacacgagactcttcaagcaatttttacacca gtgccaggtcgtgtgcaagttgtagagaaaattgaaatgaataccaaaaaggatgtggct gatgctttgaacgaagctatagataaaagagaagaaggaattatggtgaaggatcctttg tcagtttacaaaccagacaaacgtggtgaaggctggctaaaaattaagccagaatatatt gatggcttgatggatgagcttgacatcttaattgttggtggttactttggtaaaggtcat cgcggtggaatggtgtctcatttcttgtgtgctgttgctgaacctccatcacctggtgat aaaccatcagtcttccactctctttgccgtgtgggttctggttatacaatgaaggagctg tacgacttgggattgaaactagcagatcattggaagccttaccacagaagagacgcacca gcaaatattttatgtggcactgaaaagccagaagtctacattgagccttgtaattctgtc attctgcaagtcaaagcggctgaaattgtgaagagtgacatgtataaaacaagctgtagc ttgcgctttccccgaattgaaaggatccgagatgataaagagtggtatgaatgcatgact ctgaacgatttagaccagcttcaaaatatggcagaagggaaacttgcatccaaacatgtt gacatgaatgacgaagaaccacataagaaaaagcggaaagctgttccaaaggtcaaaaag gttgttggcattgcggaacagttcaagggccaagatctgtcgtgtgtggacaaagtgtcc agcatttttgatgatgttgaattctgtgtcctgaatggtcctcataaccaccctaaagct gatctggagaagggaatagctgaatgtggaggattggtcgtgcagaaccccggaccagac acatactgtgttgttgctgacacagttaatgttcgtgtcaaaaaccttattgctgcaaac acacatgatgtggtgatggttgactggttgctaaactgtttgcaaaagaagcagattttg ccatggcaacctaaacatatgattcacatgtcaccttccacagaagaacattttgcccag gaatatgatcactatggtgacagctattttgtcaacactgatgaaagccagcttcgggag gtgttcaaaaggatggatcaaccagaacagaagttctcttttgaaactattgcagactta gaacagcgatattcatgggacacgtcacctctgagcatgttcagacattgtgtcatttac atggatatggacttcccttctgccataagcgatcccaacagtcagatacgtgacacaagc ttagatttaagggccttggagctgcggtattatggggcaaaagtcgtcggagaactgaat gaaggtgtctcacatgtggtcaaacatgatcgtggccaacatctccaaaaactgaaatct ctcaggagaacctttgaaaggaagttcaagattgtgtcagagtcgtgggtaactgattct gtgaaagcaggaattgtgcaggatgaaagaaattaccttctatag

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