Callorhinchus milii (elephant shark): 103178709
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Entry
103178709 CDS
T03088
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04120
Ubiquitin mediated proteolysis
cmk04210
Apoptosis
cmk04217
Necroptosis
cmk04510
Focal adhesion
cmk04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103178709
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103178709
04217 Necroptosis
103178709
09144 Cellular community - eukaryotes
04510 Focal adhesion
103178709
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103178709
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103178709
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103178709
03029 Mitochondrial biogenesis [BR:
cmk03029
]
103178709
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103178709
Peptidases and inhibitors [BR:
cmk01002
]
Peptidase inhibitors
Family I32: IAP family
103178709
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103178709
Mitochondrial biogenesis [BR:
cmk03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103178709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
zf-C3HC4_3
Prok-RING_4
RNA_pol_N
Motif
Other DBs
NCBI-GeneID:
103178709
NCBI-ProteinID:
XP_042196627
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MDITTDCQQDLSNEMYRLGTFINFPSDVPISERTLARAGFIYAGVKDQVRCFSCGGMIEN
WQHGDSAVGKHRQLFPACEFINGSWLNSEQMPTTYAEGHQLLENGTPRYINRQLNNLSSP
IDDAVRTKSIEDMSHLRPRNPDMCNEEDRMNTFSNWPSYGIVAPRELAKAGLYYTSNNDQ
VQCFSCGGLMQNWEPGDRAMLEHKRHYPMCSFVLGYDVGNIPHEQNSCTAGAIHPSSNNE
PRANFSSFPRHPDKQTFDARLETFRSSAGYFHNVEDFARAGFYSTGDGDSVKCFYCDGGL
RNWESGDDIWEQHAKWFPGCDFLIHHKGQVFVNEVQLKKLFNSTTGVLPEDYLSKPEPED
RLMTTAAVQGALGMGFDRSLVKELVKKKFQAMGDNYTSVQALVADLLIAEKGGTQDVEQG
DKPNKSISMEDQLKKLKEEKCCKVCWERDVSIAFVPCGHVATCKECSVAVSSCPICCVKI
QEKVRIYMS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatattacaacagactgtcaacaagacctttcaaatgagatgtataggcttggaaca
tttataaactttccatctgatgtccctatttctgaaagaacattggccagagcagggttc
atttacgctggtgttaaagatcaggtgagatgttttagttgtggtggaatgatagaaaac
tggcaacatggagattctgcagtcggaaaacacaggcaactattcccagcctgtgagttt
attaacggttcatggttgaacagtgagcaaatgccaaccacatatgctgaaggtcatcaa
ctgttagagaatggaacccctaggtatattaatagacaattaaataatttaagttctcct
attgatgatgcggtgagaactaaaagcattgaagacatgtctcatctacgacctagaaat
cctgacatgtgtaatgaagaagatcgaatgaataccttcagtaactggcctagctatggc
atagtagctccgagagaacttgccaaagcaggactttactataccagtaataatgatcag
gttcaatgcttcagttgtggtggattaatgcaaaactgggaacctggagatcgagccatg
ttagagcacaagagacattatcccatgtgttccttcgttttgggatatgatgttggtaat
ataccccatgaacaaaatagttgtactgcaggtgcaatccacccttcaagtaataacgaa
ccaagagcaaacttttccagttttcccagacacccagacaagcagacatttgatgcacgc
ctcgaaaccttcaggtcgtcagcaggttactttcataatgttgaagactttgcgagagct
ggtttttacagcacaggtgatggagacagcgtgaagtgtttttactgtgatggaggattg
agaaattgggaatctggtgatgacatctgggaacagcacgcaaaatggtttccaggctgt
gattttctgattcatcataaaggccaggtttttgtgaatgaagttcagttaaagaaattg
ttcaattctacgactggagtgttaccagaagactatctttctaaaccggaaccagaagac
cggctaatgacaaccgctgcagttcagggtgctcttggaatgggttttgacagatcgctg
gtgaaagagctagttaaaaaaaaatttcaggcaatgggtgacaactacacatctgttcaa
gctcttgttgcagatctactgatagctgaaaaaggaggaacccaagatgtggaacagggt
gacaaaccaaataaaagtataagcatggaagaccagttgaaaaagttgaaggaagagaag
tgttgcaaagtttgctgggaacgagatgtttccattgcctttgtaccctgtggtcatgtc
gcgacttgtaaagaatgttctgttgctgtctccagttgccctatatgttgcgtgaaaatt
caagagaaagttagaatatacatgtcttaa
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