Callorhinchus milii (elephant shark): 103178954
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Entry
103178954 CDS
T03088
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103178954
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103178954
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103178954
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103178954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
103178954
NCBI-ProteinID:
XP_007892167
UniProt:
A0A4W3JPP9
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYIDRIPLQIVRAENELSLEEKAYLNAVEKGDYASVKQGLEEAEIYFN
ININCTDPLGRSALLIAIENENLEIMELLLSFSVYVGDALLYAIRKEVVGAVELLLRYRK
PSGEKQVPPLLMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQRGVSIPRPHQVRCNCVE
CVSSSEVDSLRHSRSRLNIYRALASPSLIALSSEDPILTAFQLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSDELDLQKCHDLAKLKLAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLLTSFTIGFLFPVLSTVYLVVPKSRLGLFI
KKPFIKFICHTGSYLTFLFLLLLASQHIAKTDLHMQGPPPTIVEWLILPWVLGFIWAEIK
EMWDGGFNEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPRQEWEMWHPTLIAEA
FFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFTEFV
GATMFGTYNIISLVVLLNMLIAMMNNSYKLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKCIWYLVKWLHAQACPKRCSEDEQKKHENLREFTERHADDLIQNQHYQEVIKN
LVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKSSRRTYSTSSDGVQ
MGDMEEGGAEENKIVSFSLAGEASDKRLKMNSFRVSALIKSVSGIALSEDSSKNNGLSKQ
SAAVRNGNCFQGNKKDSFKRLGLLFSRMNGQLAEPSPEPVATVSDGLVQAHGMWQDFKYS
QISSPGDVTRSEGSLDAVGLVPQVIRKNGIDSHCPANRSDSFHCSSNNCASNNKLIDSAD
DVYNSWGEACDLLMTSWKAGQEDYVTTQL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctttactacaaaaaggtcaactactcgccctacatagaccgtatcccgcta
cagattgtgcgggcggagaacgagctgtctctggaggagaaagcttacctgaatgcggtg
gagaaaggcgactacgccagtgtcaagcagggcctggaggaggccgagatctacttcaac
atcaacatcaactgcacggaccctctgggccgcagtgccctcctcatcgccatcgagaac
gagaacctggagatcatggagctgctcctcagcttcagcgtgtacgtgggcgatgcactg
ctctacgctatacgcaaggaggtggtcggggccgtggagctgctgttgcgttatagaaag
cccagcggggaaaagcaggtccctcctttactgatggatgcccagttctcggaattcact
cccgacatcacgcccatcatgctcgctgcccacaccaacaactacgagattatcaagctt
ctggtccagaggggggtctccatccctcgtccccaccaggtgaggtgcaactgcgtggag
tgtgtgtccagctcggaggtggacagcctcaggcactcacgctcacggctgaacatctac
cgggccctggccagcccctcgttgatcgccttgtccagtgaggaccccatcctcaccgcc
tttcagctgggctgggagctgaaggagctgagcaaggtggagaacgagttcaaggctgag
tacgaggagctgtcccagcagtgcaagcgctttgctaaagatctgctggaccaggctcgc
agctccagggaactggagatcatactgaaccacagagatgaccaaagtgatgagttggac
ctgcagaaatgccacgatctcgccaaactgaagctggctatcaagtaccaccagaaggag
ttcgtggctcagcccaattgccagcagctgttggccaccctgtggtacgatgggttccca
ggctggcgtcgccgacactgggctgtcaagctcctcaccagcttcaccatcggcttcctg
tttccggtgctttccaccgtgtacctggtggtgccgaagagccggctgggactgttcatc
aagaaacccttcatcaaattcatctgccacaccggctcctacctgaccttcctcttcctc
ctactgttggcgtctcagcacatcgccaagacggacctccacatgcagggccctccccca
accattgtggagtggttgatactgccgtgggttttaggtttcatttgggccgagatcaaa
gagatgtgggatggcgggttcaacgagtacatccacgactggtggaatctcatggacttt
gcgatgaactccttgtatctggccaccatctcgctcaagattgttgcttacgtgaagtat
aatggctcccggccacggcaggagtgggagatgtggcaccccacactgattgcagaagcc
ttctttgcgatcgccaacatcttcagctctctgcgcctgatctccctgttcaccgccaac
tcccacctggggccgctgcagatctccctgggccgcatgttgctggacatcctcaagttc
ctcttcatctactgcctggtgctgctggcctttgccaacggactcaaccagctgtacttc
tactacgagaccagcgcttctgaagagccgaataactgcaaaggcatccggtgtgagaag
cagaacaacgccttctccacgctgttcgagaccctgcagtcgctcttctggtcaatcttc
gggctgttgaacttgtacgtgactaacgtgaaggctcggcacgagttcacagagtttgtt
ggggccacgatgttcgggacttacaacatcatctctctggtcgtcctcctcaacatgctg
atcgccatgatgaacaactcctacaagctcattgcggaccatgcggacattgagtggaag
tttgcgcggacgaagctgtggatgagttatttcgatgaaggagccacactgccgcctccg
ttcaacatcatccccagccccaagtgcatctggtacctggtcaagtggctccacgctcag
gcctgccccaagaggtgctccgaggacgagcagaagaagcacgagaacctccgagagttc
acagaacggcatgcagatgacttgatccagaaccaacattaccaggaggttattaaaaat
ctagtcaaaagatacgtggcagcgatgatcagaagtgccaaaaccgatgaagggctgaca
gaagaaaattttaaggagctgaaacaggacatttccagtttccgctatgaggttctggac
ctcttggggaacagaaagtcctctcgcaggacctactcgactagcagtgatggggtgcag
atgggggatatggaggagggcggagcagaggagaacaagatcgtgtccttcagcctggca
ggagaggccagcgacaagaggctgaagatgaactcgttcagagtttcggccctcatcaag
tcggtatcgggcatcgcgctcagcgaggacagctccaaaaataacgggctgagcaagcag
tcggcggcagtgaggaacggcaactgctttcagggcaacaagaaggactcgttcaagagg
ttggggctgctgttcagcaggatgaacgggcagctggccgagcccagccccgagcccgtg
gccaccgtctctgacggtttggtgcaggcacacggcatgtggcaagacttcaagtactcg
cagatctctagcccaggcgatgtgaccaggagtgagggcagcctggacgccgtggggctc
gtgcctcaggtcatcagaaagaacggaatcgatagccattgccctgccaaccgtagtgac
tccttccactgttcttccaataactgtgcctccaacaacaaactgatcgactcagccgat
gatgtgtacaactcgtggggcgaagcctgtgacctgctcatgaccagctggaaggctggg
caggaggactatgtgaccacccagttgtaa
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