Callorhinchus milii (elephant shark): 103179419
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Entry
103179419 CDS
T03088
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04020
Calcium signaling pathway
cmk04260
Cardiac muscle contraction
cmk04261
Adrenergic signaling in cardiomyocytes
cmk04270
Vascular smooth muscle contraction
cmk04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103179419 (cacna1c)
04020 Calcium signaling pathway
103179419 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
103179419 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
103179419 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
103179419 (cacna1c)
04270 Vascular smooth muscle contraction
103179419 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103179419 (cacna1c)
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103179419 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
103179419
NCBI-ProteinID:
XP_042191356
LinkDB
All DBs
Position
Unknown
AA seq
2201 aa
AA seq
DB search
MLLMFPRWNGLSEGWLSVSLVCVCVCVCVFFSLQCKCKRVAVRVFDFRGVWWVGGVWCLL
SGANYGSSRPALDHGHSNANTDGLAPEHIPGPGAALSWQAAIDAARQAKAAAMLGGNTVS
TANSTQRKRQPYSKQKKQANAATTRPPRALFCLTLKNPIRRACINIVEWKPFEIIILLTI
FANCVALAVYIPFPEDDSNATNSNLERVEYLFLIVFTVEAFLKVIAYGLILHSNAYLRNG
WNLLDFIIVVVGLFSAILEQATKAEGTNPIGGKAAGFDVKALRAFRVLRPLRLVSGVPSL
QVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYVNGTDTIGEEESAPC
NGNVGHGRQCPNETLCKNGWVGPNDGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAM
GFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKG
YLDWITQAEDIDPENEDEGMEEEKPRNMSMPTSETESVNTENVGAAEIEDLTCCASLGHR
ISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTISSEHYSQPNWLTEVQ
DTANKVLLALFTGEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGI
SVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGK
FNFDEMETKRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIRAYGGPSFPGMLVCIYFIIL
FICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERRKLARTSSPEKTTENEKPPIE
EEKKEEKIELKTITVDGDMPPSTKIGLDEYQVEENEEKNPYPTNEFPGEEEEDEPEMPVG
PRPRPLSDLQMKEKAVPMPDASAFFVFSTTNRFRVLCHRIVNDNIFTNLILFFILLSSIS
LAAEDPVHQYTRRNQILTYADYVFTSIFTVEIILKMTAYGAFIHKGSFCRNYFNILDLVV
VSVSLISFGMQSSAIAVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVALRTIGNIVIVT
TLLQFMFACIGVQLFKGKLYSCTDGSKQKESECKGQYILYKDGNVNQPIISHRKWENSEF
NFDDVPSAMMALFTVSTFEGWPQLLYRAIDSHTEDTGPIYNYRVEISIFFIIYIIVIAFF
MMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKVWYVV
NSTYFEYLMFVLILLNTICLAMQHQGQAQRFSHAMDVLNMLFTGLFTVEMILKLIAFKPR
GYFSDPWNVFDFLIVIGSIIDVILSEINPSPAKSESSSSRHSTINTKSSYPPQKSLMNSD
ENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIG
MQVFGKIAMIDNSHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLSCLPGKQCEKESASQ
EAEFICGTHFAFFYFVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIW
AEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNAT
LFALVRTALRIKTEGNLEQANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYAT
FLIQDYFRKFKKRKEQGIVGKAVQKNSLSLQAGLRTLHDIGPEIRRAISGDLTAEEELEK
AMKEAASVASEDDIFRRAGGLFGNHVSYYPGDGRLSFPQTFTTQRPLHLNKSGSSQAEID
SPSHEKLVDSTFTPSSYSSSGSNANINNANNTALSRLSSPVNFQSTVNTVDGPGSSLTCA
LLLQGTAWKLDPESSDSGESHLPIIQRVEASPDETYDENFNEGPDCCSEESMLSSQLICY
QDEEDNKQLTPSVDFCEESEKKWQSSPKGLLSVTSLGRRSSFHLECLKRQKNHGLAISRT
ASLSQRTALPLHLIQHQALAVAGLSPLLRRSHSPTQFSRLTTTPPSTPCSRGRLQQHIPT
LFLDGIQSYEKLNSSLPSVNSNSWYSDNSNGNIKKVRPVSLTVPYPFREKGNECHSSAGS
LVEAVLISEGLGRYAQDPKFVEAAAHEIADACDMTFEEMENAADNLLSGNKKASPNGNLL
PYVNCRDNQPQDPVPDSAEEEQDCEKSEEEFADEMIYVSTL
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgatgtttcctcggtggaatgggctcagcgagggatggctgtcggtttctctg
gtgtgtgtgtgtgtgtgtgtgtgtgtgtttttctcgttgcaatgcaaatgcaaacgtgtt
gcggtgcgtgtttttgatttccggggtgtgtggtgggtggggggggtttggtgtttgctt
tcaggcgcaaactacggcagcagtcggccagcacttgaccatggacactccaacgccaac
acggacggtttggcaccggagcacatccccggaccgggggctgccctgtcctggcaggca
gccatcgacgcggccagacaagccaaggctgccgcgatgctggggggcaacacggtctcc
accgccaactccacccaaaggaagaggcaaccgtacagcaaacagaagaaacaagccaac
gccgccaccacacgaccgccgcgggctctcttctgcctgactctcaaaaaccccatcagg
agagcgtgcattaacatagtcgagtggaagccattcgaaataatcattctcctcaccatt
ttcgccaattgcgtggccttagctgtctacataccttttccagaagatgactcgaatgca
accaattccaatctggaacgagtggaatatctctttctgatcgtttttaccgtggaagca
tttttgaaagtaatagcttatggacttatccttcactctaatgcttacctcaggaatggc
tggaatttgctagatttcatcatagtggttgtagggctttttagtgctattttagaacaa
gcaaccaaagcagaggggactaacccaattggagggaaagctgctggttttgatgtgaaa
gctctgagagcatttagagtcctgagaccattacgtctggtatctggagttcccagcctc
caagttgtgttaaattcaatcatcaaggccatggtaccattgctgcacattgctttattg
gtactttttgtaattatcatctacgctattataggattagaactcttcatgggcaaaatg
cacaaaacctgctacgtaaatggaacagacacaattggtgaagaagagtctgctccatgc
aacggaaacgtgggacatggccgccagtgtccaaatgaaacactctgtaagaatggatgg
gttggccccaatgatggaatcactaacttcgacaactttgcctttgctatgctaactgta
tttcagtgcatcaccatggagggatggacagatgtattatattggatgcaggatgccatg
ggctttgagttaccctgggtctattttgtgagtctggtcatctttggatcctttttcgtt
ctaaatctggttcttggtgtattaagcggagagttttccaaagagagagagaaggccaag
gctcgtggtgattttcagaaactaagagagaaacaacaattagaggaggatctaaaggga
tacttggactggattactcaagctgaagacatagatccagaaaatgaagatgagggaatg
gaagaagagaaacccagaaacatgagcatgcccactagcgaaactgagtctgtgaacact
gagaatgtgggtgctgcagaaatagaagacttgacctgctgtgcaagtcttgggcaccgg
atatccaagtccaaattcagtcgatattggcgcagatggaaccgattttgtaggagaaag
tgtcgcgctgctgtgaaatccaatgtgttctattggcttgtgatatttctggttttcctc
aacacccttacaatttcatctgaacactatagccagcctaactggctgactgaagttcaa
gatactgcaaacaaagtcctcctggcactttttactggtgaaatgctgcttaagatgtac
agtcttggcctgcaagcctactttgtatctcttttcaaccgctttgactgtttcattgtc
tgtggaggaatccttgaaactattttagtggagactaagatcatgtcccccctaggcatt
tcggtgcttcgttgtgtgcggcttctaaggatatttaagattacaaggtactggaattct
ttgagtaacctggtagcatcccttttgaactcagtccgatccattgcttcattattgctg
cttctgttccttttcatcatcattttttctctgttgggtatgcaactatttggaggaaag
ttcaactttgatgagatggaaaccaaaaggagtacatttgataactttcctcagtccctt
ctcacggtcttccagatcctgacaggtgaggactggaattcagtcatgtatgatgggata
agagcatacggagggccatctttcccaggaatgttggtctgcatttacttcatcatcctc
ttcatttgtgggaactatattctattaaatgtgttcttggccattgctgtggacaatttg
gctgatgccgagagtttgacttctgcccaaaaggaagaagaggaagaaaaggaacgcaga
aagcttgccaggacttcaagtccggagaaaactacagagaatgaaaagccaccaatagag
gaagagaagaaggaagaaaaaattgaactaaaaacgatcacggtagatggagacatgcca
ccatctacaaagattggattggatgaataccaggttgaagagaatgaggagaagaatccc
tatcctaccaatgagttcccaggtgaagaagaagaggatgagccagaaatgcctgtagga
ccacgtccccgtccgctttctgatctgcagatgaaagagaaagcagttcctatgcctgat
gcgagtgcattctttgtgttcagtacaacaaacaggtttcgtgtgctgtgtcacaggatc
gtcaatgacaacatttttacaaatcttatcttattcttcatcctcttgagtagtatttca
ttggcagcagaggatcccgtccatcagtatacgcgcagaaaccaaatccttacctatgca
gattatgtcttcactagtatctttacagtagaaatcatactaaagatgactgcttatggg
gctttcattcataaaggctccttctgcagaaattatttcaacatactggacttggtggtg
gttagcgtctctctcatctcctttggaatgcagtccagcgcaattgcagtagtaaagatt
ctccgagttttgcgagtgttgagacctttgagagccatcaacagagccaaggggttgaag
cacgttgttcagtgtgtgtttgtggccctgaggaccattggtaacattgtgatagtgacc
actttactgcaattcatgtttgcttgtattggagttcagctcttcaaggggaaactctat
tcctgcacagatggatccaagcaaaaggaatctgaatgcaaaggtcaatatattctgtac
aaagatggaaatgtaaaccaaccaataataagtcaccgtaaatgggagaacagtgaattc
aactttgatgatgtcccctctgctatgatggctcttttcactgtttctacctttgaaggc
tggccacagttgctgtatcgagccattgactctcacacagaggacactggtccaatttac
aactaccgtgtggagatatctattttcttcatcatctacatcattgttattgccttcttc
atgatgaatatcttcgtaggtttcgtcattgtcacattccaggaacagggagaacaagag
tacaaaaactgtgagctggacaaaaatcagcgccaatgtgtggagtacgccctaaaggct
cggcctctgcgacggtacatcccaaagaacccttaccagtacaaagtctggtatgtggtg
aactcaacctactttgagtacctgatgtttgttctgatcttgctgaacaccatctgcttg
gctatgcagcatcaaggtcaggcccaacgcttcagtcatgcaatggatgtcctcaatatg
ctcttcactggacttttcacggttgaaatgatcctgaaattaatcgcgttcaagcccaga
ggttactttagtgatccctggaatgtttttgacttcctcatcgtaattggcagcattata
gacgtcattctgagtgagatcaatccttcacctgcaaaaagtgagagctccagcagcagg
cactccacaatcaatactaaatccagctatccaccacagaaaagcttgatgaattcagac
gaaaactctcgcatttccatcaccttcttccgtctttttcgggtgatgcgtttggtcaaa
ttgctgagtcgaggtgagggaatacgaactctgctgtggacatttatcaaatcatttcag
gcacttccatatgtcgctcttctgattgttatgctgtttttcatctatgctgtgattgga
atgcaagtgtttggtaaaattgccatgattgataatagtcacatcaacaggaacaacaac
ttccaaacctttccacaggctgttctgctgctcttcagatgtgctacaggtgaagcctgg
caagaaattatgctatcctgcctcccaggaaaacagtgtgagaaagaatcagcaagtcag
gaggcggaattcatctgtgggactcactttgctttcttctactttgttagcttctacatg
ctgtgtgcctttttgatcattaacctctttgtggctgtaatcatggataattttgactat
ttaacacgtgattggtccattctgggtcctcatcatcttgatgaatttaagagaatctgg
gccgagtatgatcctgaggcaaagggacgtatcaagcacttagacgtggttacactgcta
agaagaatacagcctcctttaggatttggcaagctgtgcccacatcgtgttgcctgcaaa
cgcttggtatctatgaacatgcctttaaacagcgatggcacagtcatgtttaatgcaact
ctctttgctttggttcggactgcactgagaattaaaactgaaggaaacttggagcaagcg
aatgaggagctgcgagcaattgtcaagaaaatctggaaacgcacaagtatgaagctgctg
gatcaggttgtaccaccagcaggagatgatgaagttactgtgggcaagttctatgccacg
ttcctaatccaggattacttcagaaagttcaagaagcgcaaagaacagggcatagttgga
aaagcagtgcagaaaaattcactttctttgcaggctggtctgcgtactttacatgatatt
ggccctgagattcggcgtgccatatctggagacctcacagcagaggaagaactggaaaag
gcaatgaaggaagctgcttcagtggcatctgaagatgatatcttcaggagggctggtggt
ctgtttggtaatcatgtcagctattatccaggtgatgggaggctctctttcccacagaca
ttcaccacccagcgccctttgcacctcaataaatcgggaagctcccaagcagaaattgac
tcaccttctcatgagaagctggttgattctacgtttactccaagcagctattcctcttct
ggatcaaacgccaacatcaacaatgctaataacactgccttgtccagattatcgagccca
gtcaacttccaaagcactgtgaacacagtggatggtcccgggagttcactgacttgcgca
cttttattacaaggaacagcgtggaaacttgatcccgaaagctcagactccggagaaagt
cacttgccaattatccaacgggtggaagcatctccggatgaaacttacgatgaaaatttt
aatgaaggtcctgattgctgcagtgaagaaagcatgctttcttcacaactgatttgttat
caggatgaggaggataacaaacagcttactccatcagtagacttttgtgaagaaagtgaa
aaaaaatggcagtcttctccgaaagggcttctttcagtaacatcgttaggaagaagatca
tcatttcacctggagtgcctgaagagacagaagaatcacgggttagcaatctctcggaca
gcgtcactctctcagaggacagcactaccactgcacttaatccagcaccaggcgttagct
gttgctggtctgagcccgctgctcaggagaagccattctccaacacaattttccagattg
accaccacacctccttctactccatgcagtagagggaggttgcagcaacacatcccaacc
ctattcctggatggcattcaatcctacgagaaactaaacagcagccttccgtcagtaaat
tctaattcctggtactctgacaactcaaatggaaatatcaaaaaggtcaggccagtttct
ctgaccgtaccctatcctttcagggaaaagggcaatgagtgtcatagcagtgctggtagt
ctggtagaggcggttctgatctcagaggggcttggtcgatatgcacaagacccaaaattt
gttgaggcagcagcacatgaaattgctgatgcctgcgacatgacgttcgaagagatggag
aacgcagcagacaacttgttgagtggcaataagaaagctagcccaaatggcaatctgtta
ccatatgtgaactgtagagacaaccagccacaggaccctgtgccagatagcgcagaagag
gagcaggactgtgagaaaagcgaggaggaatttgcagatgagatgatttatgtaagcacc
ctgtag
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integrated database retrieval system
