Callorhinchus milii (elephant shark): 103179828
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Entry
103179828 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103179828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103179828
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
103179828
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103179828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
TIP41
Motif
Other DBs
NCBI-GeneID:
103179828
NCBI-ProteinID:
XP_007893492
UniProt:
A0A4W3I009
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MDGKLLPVPGMTLPPEYFQQWLDTVQQHRALQPPHEQRPPGPELGSMEEATAPPDAPVAP
KAKRGRPPKSQQKKSAGPGPKRAKAEGKSGGKQEKITNAFKTVKRKVNRFNGTTEAELLT
KTLPDILTYDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLVDKPLNHMDDNSL
PEKYGIGFTNMVERTTPGSKDLSSKEIREGGKILLQKLQKFKPLIAVFNGKCIYENFSKE
VFGVKVKKLDFGQQPHKIPEGETVVFVMPSSSARCAQFPRAQDKVHYYIKLKELRNHLRG
VKAHTEVQEVEYSFDLKKAQEDAKRMAVXEEKYDPGYEAAYGGKYLDKSNESNGQCNFST
TDPAAATNSEFSAGSTFCQVPDGQWMTQCFADQIPSINYSAQPQAENST
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaagctgctgccggtccctggcatgacgctgccgcccgagtatttccagcaa
tggctcgacaccgtccagcagcaccgagccctgcaaccccctcacgagcagcgaccgccg
gggcccgagctcggcagcatggaggaggcgactgccccgccagacgcaccagtggctcca
aaagctaagcgaggaaggcctccaaaatcacagcaaaaaaaatcggcaggcccaggccct
aaacgagccaaagctgaggggaagtcgggaggaaaacaagaaaaaatcacaaatgctttt
aaaactgtgaaaagaaaagtcaatcgattcaatgggacaacagaggctgagcttcttacc
aaaacactgccagatattttaacgtacgatttggatattgtaattattggaattaatcct
ggactaatggcagcttacaaaggacatcattaccctggaccagggaatcacttctggaaa
tgcttatttttgtcaggtcttgttgacaagcctttaaatcatatggatgataattcttta
ccagagaaatatggaataggttttaccaacatggtggagagaacaactccaggaagcaaa
gatctttcaagtaaagagattcgtgaaggagggaaaatacttctgcaaaaacttcaaaaa
tttaaaccgctgattgctgtttttaatggaaaatgcatttatgaaaattttagcaaagaa
gtatttggagttaaggtcaaaaaattggattttgggcagcagccgcacaagatccctgaa
ggagaaacagtggtctttgtcatgccttcttctagtgcacgatgtgcacagtttccccga
gcccaggacaaggtacattactatatcaaattaaaggaattgcggaatcacttgagaggc
gttaaagctcacacagaggtgcaagaagttgaatattcatttgatctgaaaaaagctcaa
gaggatgccaaaaggatggcagtcnaagaggaaaaatatgatcctggttatgaagctgct
tatggaggcaaatatcttgacaaatccaatgagagtaatggccagtgtaatttctcaaca
actgacccagccgcagccactaattcagagttcagtgctggctcaacattttgccaggtt
cctgatggacaatggatgactcagtgttttgcagatcagattccctcaatcaattactct
gcacaaccgcaagccgaaaatagtacataa
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